RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 LPGAT1Q92604 370 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 C10orf90Q96M02 699 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 BARD1Q99728 777 aaKnown RBP7.38□□□□□ -1.23
VPS50-204ENST00000438395 PLCD4Q9BRC7 762 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 KIFC1Q9BW19 673 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 RBSNQ9H1K0 784 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 INTS10Q9NVR2 710 aaKnown RBP7.38□□□□□ -1.23
VPS50-204ENST00000438395 SYBUQ9NX95 663 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 ABI3Q9P2A4 366 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 C19orf25Q9UFG5 118 aaPredicted RBP7.38□□□□□ -1.23
VPS50-204ENST00000438395 SOX13Q9UN79 622 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 RUVBL1Q9Y265 456 aaKnown RBP7.38□□□□□ -1.23
VPS50-204ENST00000438395 CRYL1Q9Y2S2 319 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 CELSR2Q9HCU4 2923 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 A0A0A6YYC8 382 aaPredicted RBP7.37□□□□□ -1.23
VPS50-204ENST00000438395 A0A0U1RQJ8 604 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 ARHGAP10A1A4S6 786 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 ADARB2-AS1A8MUL3 147 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 PRSS44E7EML9 344 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 I3L1I5 382 aaPredicted RBP7.37□□□□□ -1.23
VPS50-204ENST00000438395 MYO1CO00159 1063 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 E2F3O00716 465 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 FFAR3O14843 346 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 GPR42O15529 346 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 ZBTB14O43829 449 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 PRICKLE3O43900 615 aaPredicted RBP7.37□□□□□ -1.23
VPS50-204ENST00000438395 NRP2O60462 931 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 ZG16O60844 167 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 PSIP1O75475 530 aaKnown RBP7.37□□□□□ -1.23
VPS50-204ENST00000438395 MATN4O95460 622 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 MLYCDO95822 493 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 SLC16A8O95907 504 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 CCDC175P0C221 793 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 C8orf89P0DMQ9 161 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 COX6A1P12074 109 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 ENO3P13929 434 aaPredicted RBP7.37□□□□□ -1.23
VPS50-204ENST00000438395 TPSB2P20231 275 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 TNFSF10P50591 281 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 ADARP55265 1226 aaKnown RBP7.37□□□□□ -1.23
VPS50-204ENST00000438395 ZNF33BQ06732 778 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 GPS1Q13098 491 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 FASTKQ14296 549 aaKnown RBP7.37□□□□□ -1.23
VPS50-204ENST00000438395 TPSAB1Q15661 275 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 HKDC1Q2TB90 917 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 PRTGQ2VWP7 1150 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 KLHL38Q2WGJ6 581 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 ARMC3Q5W041 872 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 MTFR2Q6P444 385 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 LRRC8BQ6P9F7 803 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 CES3Q6UWW8 571 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 TMEM207Q6UWW9 146 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 TMEM139Q8IV31 216 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 TMEM151BQ8IW70 566 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 REXO1L1PQ8IX06 675 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 PALM2Q8IXS6 379 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 DTWD1Q8N5C7 304 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 TRIM58Q8NG06 486 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 NR4A3Q92570 626 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 ZNF669Q96BR6 464 aaPredicted RBP7.37□□□□□ -1.23
VPS50-204ENST00000438395 MFSD3Q96ES6 412 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 BIRC8Q96P09 236 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 SLX1AQ9BQ83 275 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 XAB2Q9HCS7 855 aaKnown RBP7.37□□□□□ -1.23
VPS50-204ENST00000438395 LZTFL1Q9NQ48 299 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 CCDC177Q9NQR7 707 aaPredicted RBP7.37□□□□□ -1.23
VPS50-204ENST00000438395 NOP53Q9NZM5 478 aaKnown RBP7.37□□□□□ -1.23
VPS50-204ENST00000438395 STOX2Q9P2F5 926 aaPredicted RBP7.37□□□□□ -1.23
VPS50-204ENST00000438395 COPG2Q9UBF2 871 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 ENTPD4Q9Y227 616 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 MAD1L1Q9Y6D9 718 aa7.37□□□□□ -1.23
VPS50-204ENST00000438395 CRYBG3Q68DQ2 2970 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 CCDC168Q8NDH2 2452 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 IGLV3-12A0A075B6K2 115 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 IGHV1-45A0A0A0MS14 117 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 TRGV8A0A0C4DH27 118 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 A0A1W2PPV9 198 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 MAGEB16A2A368 324 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 KLHL18O94889 574 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 RASAL1O95294 804 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 F10P00742 488 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 STSP08842 583 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 ERGP11308 486 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 HRH2P25021 359 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 ARNTP27540 789 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 GRNP28799 593 aaKnown RBP7.36□□□□□ -1.23
VPS50-204ENST00000438395 TNFRSF8P28908 595 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 GRK3P35626 688 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 RGS4P49798 205 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 KCNK10P57789 538 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 SKP1P63208 163 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 PRDX1Q06830 199 aaKnown RBP7.36□□□□□ -1.23
VPS50-204ENST00000438395 Q0VFX4 171 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 CUL1Q13616 776 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 DHX34Q14147 1143 aaKnown RBP7.36□□□□□ -1.23
VPS50-204ENST00000438395 TRIP13Q15645 432 aaPredicted RBP7.36□□□□□ -1.23
VPS50-204ENST00000438395 ZRSR2Q15696 482 aaKnown RBP7.36□□□□□ -1.23
VPS50-204ENST00000438395 ACSBG2Q5FVE4 666 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.36□□□□□ -1.23
VPS50-204ENST00000438395 C1QL3Q5VWW1 255 aa7.36□□□□□ -1.23
VPS50-204ENST00000438395 ATG9BQ674R7 924 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms