RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 NEURL1O76050 574 aa13.95□□□□□ -0.18
HDAC8-213ENST00000436675 SUN1O94901 812 aa13.95□□□□□ -0.18
HDAC8-213ENST00000436675 PKMP14618 531 aaKnown RBP13.95□□□□□ -0.18
HDAC8-213ENST00000436675 IL1RNP18510 177 aa13.95□□□□□ -0.18
HDAC8-213ENST00000436675 DNAJA1P31689 397 aaKnown RBP13.95□□□□□ -0.18
HDAC8-213ENST00000436675 RFC3P40938 356 aa13.95□□□□□ -0.18
HDAC8-213ENST00000436675 XCR1P46094 333 aa13.95□□□□□ -0.18
HDAC8-213ENST00000436675 TTPAP49638 278 aa13.95□□□□□ -0.18
HDAC8-213ENST00000436675 IST1P53990 364 aa13.95□□□□□ -0.18
HDAC8-213ENST00000436675 NDUFA9Q16795 377 aa13.95□□□□□ -0.18
HDAC8-213ENST00000436675 SFT2D3Q587I9 215 aa13.95□□□□□ -0.18
HDAC8-213ENST00000436675 PAPD4Q6PIY7 484 aaKnown RBP13.95□□□□□ -0.18
HDAC8-213ENST00000436675 CD163Q86VB7 1156 aa13.95□□□□□ -0.18
HDAC8-213ENST00000436675 CNGA4Q8IV77 575 aa13.95□□□□□ -0.18
HDAC8-213ENST00000436675 SPNS2Q8IVW8 549 aa13.95□□□□□ -0.18
HDAC8-213ENST00000436675 MARVELD2Q8N4S9 558 aa13.95□□□□□ -0.18
HDAC8-213ENST00000436675 M1APQ8TC57 530 aa13.95□□□□□ -0.18
HDAC8-213ENST00000436675 PKP4Q99569 1192 aa13.95□□□□□ -0.18
HDAC8-213ENST00000436675 ZNF559Q9BR84 538 aa13.95□□□□□ -0.18
HDAC8-213ENST00000436675 CHRAC1Q9NRG0 131 aa13.95□□□□□ -0.18
HDAC8-213ENST00000436675 TNFRSF10DQ9UBN6 386 aa13.95□□□□□ -0.18
HDAC8-213ENST00000436675 RIMKLBQ9ULI2 386 aa13.95□□□□□ -0.18
HDAC8-213ENST00000436675 DUSP10Q9Y6W6 482 aa13.95□□□□□ -0.18
HDAC8-213ENST00000436675 A0A1B0GTH9 108 aa13.94□□□□□ -0.18
HDAC8-213ENST00000436675 TCRBV7S2A1N4TA0A589 114 aa13.94□□□□□ -0.18
HDAC8-213ENST00000436675 TXNDC9O14530 226 aa13.94□□□□□ -0.18
HDAC8-213ENST00000436675 NDC80O14777 642 aa13.94□□□□□ -0.18
HDAC8-213ENST00000436675 CDC40O60508 579 aaKnown RBP eCLIP13.94□□□□□ -0.18
HDAC8-213ENST00000436675 NIPSNAP2O75323 286 aa13.94□□□□□ -0.18
HDAC8-213ENST00000436675 CDC123O75794 336 aaPredicted RBP13.94□□□□□ -0.18
HDAC8-213ENST00000436675 MATN4O95460 622 aa13.94□□□□□ -0.18
HDAC8-213ENST00000436675 EZRP15311 586 aaKnown RBP13.94□□□□□ -0.18
HDAC8-213ENST00000436675 FMO4P31512 558 aa13.94□□□□□ -0.18
HDAC8-213ENST00000436675 PNLIPRP1P54315 467 aa13.94□□□□□ -0.18
HDAC8-213ENST00000436675 CRADDP78560 199 aa13.94□□□□□ -0.18
HDAC8-213ENST00000436675 PRDX1Q06830 199 aaKnown RBP13.94□□□□□ -0.18
HDAC8-213ENST00000436675 FAM53BQ14153 422 aa13.94□□□□□ -0.18
HDAC8-213ENST00000436675 SPA17Q15506 151 aa13.94□□□□□ -0.18
HDAC8-213ENST00000436675 EXT1Q16394 746 aa13.94□□□□□ -0.18
HDAC8-213ENST00000436675 CTSL3PQ5NE16 218 aa13.94□□□□□ -0.18
HDAC8-213ENST00000436675 PRUNE1Q86TP1 453 aa13.94□□□□□ -0.18
HDAC8-213ENST00000436675 EID3Q8N140 333 aa13.94□□□□□ -0.18
HDAC8-213ENST00000436675 SLC5A8Q8N695 610 aa13.94□□□□□ -0.18
HDAC8-213ENST00000436675 HORMAD2Q8N7B1 307 aa13.94□□□□□ -0.18
HDAC8-213ENST00000436675 PPHLN1Q8NEY8 458 aaKnown RBP13.94□□□□□ -0.18
HDAC8-213ENST00000436675 ZCCHC10Q8TBK6 192 aa13.94□□□□□ -0.18
HDAC8-213ENST00000436675 ATG4AQ8WYN0 398 aa13.94□□□□□ -0.18
HDAC8-213ENST00000436675 MMP25Q9NPA2 562 aa13.94□□□□□ -0.18
HDAC8-213ENST00000436675 UTP6Q9NYH9 597 aaKnown RBP13.94□□□□□ -0.18
HDAC8-213ENST00000436675 GALPQ9UBC7 116 aa13.94□□□□□ -0.18
HDAC8-213ENST00000436675 HRH3Q9Y5N1 445 aa13.94□□□□□ -0.18
HDAC8-213ENST00000436675 DNHD1Q96M86 4753 aa13.94□□□□□ -0.18
HDAC8-213ENST00000436675 H0YIG0 161 aa13.93□□□□□ -0.18
HDAC8-213ENST00000436675 H7BY64 318 aa13.93□□□□□ -0.18
HDAC8-213ENST00000436675 SMAPO00193 183 aa13.93□□□□□ -0.18
HDAC8-213ENST00000436675 SLC25A12O75746 678 aa13.93□□□□□ -0.18
HDAC8-213ENST00000436675 CCNDBP1O95273 360 aa13.93□□□□□ -0.18
HDAC8-213ENST00000436675 SYF2O95926 243 aaKnown RBP13.93□□□□□ -0.18
HDAC8-213ENST00000436675 IFNB1P01574 187 aa13.93□□□□□ -0.18
HDAC8-213ENST00000436675 ERGP11308 486 aa13.93□□□□□ -0.18
HDAC8-213ENST00000436675 ETS1P14921 441 aa13.93□□□□□ -0.18
HDAC8-213ENST00000436675 IGFBP2P18065 325 aa13.93□□□□□ -0.18
HDAC8-213ENST00000436675 PTGS2P35354 604 aa13.93□□□□□ -0.18
HDAC8-213ENST00000436675 TAS2R50P59544 299 aa13.93□□□□□ -0.18
HDAC8-213ENST00000436675 MYBPHQ13203 477 aa13.93□□□□□ -0.18
HDAC8-213ENST00000436675 ACSBG2Q5FVE4 666 aa13.93□□□□□ -0.18
HDAC8-213ENST00000436675 THEMIS2Q5TEJ8 643 aa13.93□□□□□ -0.18
HDAC8-213ENST00000436675 CCDC71Q8IV32 467 aaPredicted RBP13.93□□□□□ -0.18
HDAC8-213ENST00000436675 KIF2BQ8N4N8 673 aa13.93□□□□□ -0.18
HDAC8-213ENST00000436675 SLC35B2Q8TB61 432 aa13.93□□□□□ -0.18
HDAC8-213ENST00000436675 FAM57AQ8TBR7 257 aa13.93□□□□□ -0.18
HDAC8-213ENST00000436675 TSLPQ969D9 159 aa13.93□□□□□ -0.18
HDAC8-213ENST00000436675 CCDC138Q96M89 665 aa13.93□□□□□ -0.18
HDAC8-213ENST00000436675 PRAP1Q96NZ9 151 aa13.93□□□□□ -0.18
HDAC8-213ENST00000436675 GSX1Q9H4S2 264 aaPredicted RBP13.93□□□□□ -0.18
HDAC8-213ENST00000436675 PACSIN2Q9UNF0 486 aaPredicted RBP13.93□□□□□ -0.18
HDAC8-213ENST00000436675 RNF6Q9Y252 685 aa13.93□□□□□ -0.18
HDAC8-213ENST00000436675 PHF3Q92576 2039 aaKnown RBP13.93□□□□□ -0.18
HDAC8-213ENST00000436675 HRNRQ86YZ3 2850 aaPredicted RBP13.93□□□□□ -0.18
HDAC8-213ENST00000436675 ZNF860A6NHJ4 632 aa13.92□□□□□ -0.18
HDAC8-213ENST00000436675 ERI2A8K979 691 aaKnown RBP13.92□□□□□ -0.18
HDAC8-213ENST00000436675 FOXO6A8MYZ6 492 aa13.92□□□□□ -0.18
HDAC8-213ENST00000436675 GOLGA8KD6RF30 607 aa13.92□□□□□ -0.18
HDAC8-213ENST00000436675 GOLGA8TH3BQL2 631 aa13.92□□□□□ -0.18
HDAC8-213ENST00000436675 MYO1CO00159 1063 aa13.92□□□□□ -0.18
HDAC8-213ENST00000436675 TFECO14948 347 aaPredicted RBP13.92□□□□□ -0.18
HDAC8-213ENST00000436675 NME2P1O60361 137 aa13.92□□□□□ -0.18
HDAC8-213ENST00000436675 RDH16O75452 317 aa13.92□□□□□ -0.18
HDAC8-213ENST00000436675 PDE9AO76083 593 aa13.92□□□□□ -0.18
HDAC8-213ENST00000436675 NSA2O95478 260 aaKnown RBP13.92□□□□□ -0.18
HDAC8-213ENST00000436675 CHRM3P20309 590 aa13.92□□□□□ -0.18
HDAC8-213ENST00000436675 NME2P22392 152 aa13.92□□□□□ -0.18
HDAC8-213ENST00000436675 RPS3P23396 243 aaKnown RBP eCLIP13.92□□□□□ -0.18
HDAC8-213ENST00000436675 NMBRP28336 390 aa13.92□□□□□ -0.18
HDAC8-213ENST00000436675 TPP2P29144 1249 aaPredicted RBP13.92□□□□□ -0.18
HDAC8-213ENST00000436675 AGTR2P50052 363 aa13.92□□□□□ -0.18
HDAC8-213ENST00000436675 SESN2P58004 480 aaPredicted RBP13.92□□□□□ -0.18
HDAC8-213ENST00000436675 PTK6Q13882 451 aa13.92□□□□□ -0.18
HDAC8-213ENST00000436675 USP10Q14694 798 aaKnown RBP13.92□□□□□ -0.18
HDAC8-213ENST00000436675 ABRAXAS2Q15018 415 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms