RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 MAT2AP31153 395 aaKnown RBP7.12□□□□□ -1.27
GARNL3-205ENST00000435213 SP4Q02446 784 aa7.12□□□□□ -1.27
GARNL3-205ENST00000435213 GPR17Q13304 367 aa7.12□□□□□ -1.27
GARNL3-205ENST00000435213 ASAH1Q13510 395 aa7.12□□□□□ -1.27
GARNL3-205ENST00000435213 HFEQ30201 348 aa7.12□□□□□ -1.27
GARNL3-205ENST00000435213 TRIM60Q495X7 471 aa7.12□□□□□ -1.27
GARNL3-205ENST00000435213 C9orf152Q5JTZ5 239 aa7.12□□□□□ -1.27
GARNL3-205ENST00000435213 FKBP1CQ5VVH2 108 aa7.12□□□□□ -1.27
GARNL3-205ENST00000435213 JADE1Q6IE81 842 aa7.12□□□□□ -1.27
GARNL3-205ENST00000435213 FSTL4Q6MZW2 842 aa7.12□□□□□ -1.27
GARNL3-205ENST00000435213 HACD2Q6Y1H2 254 aa7.12□□□□□ -1.27
GARNL3-205ENST00000435213 MSANTD1Q6ZTZ1 278 aa7.12□□□□□ -1.27
GARNL3-205ENST00000435213 GPR155Q7Z3F1 870 aa7.12□□□□□ -1.27
GARNL3-205ENST00000435213 OR2L5Q8NG80 312 aa7.12□□□□□ -1.27
GARNL3-205ENST00000435213 FAM122AQ96E09 287 aa7.12□□□□□ -1.27
GARNL3-205ENST00000435213 C19orf60Q96EN9 201 aa7.12□□□□□ -1.27
GARNL3-205ENST00000435213 NEDD4LQ96PU5 975 aa7.12□□□□□ -1.27
GARNL3-205ENST00000435213 NODALQ96S42 347 aa7.12□□□□□ -1.27
GARNL3-205ENST00000435213 MS4A7Q9GZW8 240 aaPredicted RBP7.12□□□□□ -1.27
GARNL3-205ENST00000435213 DCSTAMPQ9H295 470 aa7.12□□□□□ -1.27
GARNL3-205ENST00000435213 KAT8Q9H7Z6 458 aaKnown RBP7.12□□□□□ -1.27
GARNL3-205ENST00000435213 SPAG4Q9NPE6 437 aa7.12□□□□□ -1.27
GARNL3-205ENST00000435213 RLFQ13129 1914 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 NCF1BA6NI72 391 aaPredicted RBP7.11□□□□□ -1.27
GARNL3-205ENST00000435213 NCF1CA8MVU1 366 aaPredicted RBP7.11□□□□□ -1.27
GARNL3-205ENST00000435213 G3V2T6 193 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 SOCS5O75159 536 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 PMPCBO75439 489 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 CPN2P22792 545 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 ALDH4A1P30038 563 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 CSRP3P50461 194 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 CLCNKAP51800 687 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 IRF9Q00978 393 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 ARL13AQ5H913 290 aaPredicted RBP7.11□□□□□ -1.27
GARNL3-205ENST00000435213 SAMD4BQ5PRF9 694 aaKnown RBP7.11□□□□□ -1.27
GARNL3-205ENST00000435213 NCBP2-AS2Q69YL0 99 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 VASNQ6EMK4 673 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 FAM45BPQ6NSW5 357 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 FAM92BQ6ZTR7 304 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 TRMT11Q7Z4G4 463 aaKnown RBP7.11□□□□□ -1.27
GARNL3-205ENST00000435213 R3HCC1LQ7Z5L2 792 aaKnown RBP7.11□□□□□ -1.27
GARNL3-205ENST00000435213 RNF113BQ8IZP6 322 aaKnown RBP7.11□□□□□ -1.27
GARNL3-205ENST00000435213 PELI3Q8N2H9 469 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 CAMKVQ8NCB2 501 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 FAM45AQ8TCE6 357 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 CENPNQ96H22 339 aaPredicted RBP7.11□□□□□ -1.27
GARNL3-205ENST00000435213 NECTIN4Q96NY8 510 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 FTHL17Q9BXU8 183 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 RNF121Q9H920 327 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 CARS2Q9HA77 564 aaKnown RBP7.11□□□□□ -1.27
GARNL3-205ENST00000435213 RNF146Q9NTX7 359 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 NUDT15Q9NV35 164 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 PIM2Q9P1W9 311 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 TRAPPC4Q9Y296 219 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 MRPL42Q9Y6G3 142 aaKnown RBP7.11□□□□□ -1.27
GARNL3-205ENST00000435213 MYO18AQ92614 2054 aaKnown RBP7.11□□□□□ -1.27
GARNL3-205ENST00000435213 DLGAP1O14490 977 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 SMAD6O43541 496 aaKnown RBP7.11□□□□□ -1.27
GARNL3-205ENST00000435213 SSX4O60224 188 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 NRP2O60462 931 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 NPHS1O60500 1241 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 PAK4O96013 591 aaPredicted RBP7.11□□□□□ -1.27
GARNL3-205ENST00000435213 CRYABP02511 175 aaKnown RBP7.11□□□□□ -1.27
GARNL3-205ENST00000435213 RFC3P40938 356 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 CRATP43155 626 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 RPS9P46781 194 aaKnown RBP7.11□□□□□ -1.27
GARNL3-205ENST00000435213 KCNC1P48547 511 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 GLUD2P49448 558 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 HNMTP50135 292 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 EPHA5P54756 1037 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 ACTR1AP61163 376 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 SLC6A3Q01959 620 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 INPP5AQ14642 412 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 GLRA4Q5JXX5 417 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 MPZL3Q6UWV2 235 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 ZBTB8OSQ8IWT0 167 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 TRIM48Q8IWZ4 208 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 ANKRD52Q8NB46 1076 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 FAM156AQ8NDB6 213 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 SLC24A4Q8NFF2 622 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 UBA3Q8TBC4 463 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 LRRN4Q8WUT4 740 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 PIWIL1Q96J94 861 aaKnown RBP7.11□□□□□ -1.27
GARNL3-205ENST00000435213 ZNF300Q96RE9 604 aaPredicted RBP7.11□□□□□ -1.27
GARNL3-205ENST00000435213 SORBS1Q9BX66 1292 aaKnown RBP7.11□□□□□ -1.27
GARNL3-205ENST00000435213 FAM126AQ9BYI3 521 aaPredicted RBP7.11□□□□□ -1.27
GARNL3-205ENST00000435213 CEP41Q9BYV8 373 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 FAM49AQ9H0Q0 323 aaPredicted RBP7.11□□□□□ -1.27
GARNL3-205ENST00000435213 UNKLQ9H9P5 680 aaKnown RBP7.11□□□□□ -1.27
GARNL3-205ENST00000435213 ZDHHC2Q9UIJ5 367 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 SIX4Q9UIU6 781 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 CA14Q9ULX7 337 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 PDE10AQ9Y233 779 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 LYVE1Q9Y5Y7 322 aa7.11□□□□□ -1.27
GARNL3-205ENST00000435213 ZNF638Q14966 1978 aaKnown RBP7.11□□□□□ -1.27
GARNL3-205ENST00000435213 E9PAM4 449 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 UGDHO60701 494 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 MED6O75586 246 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 SRP72O76094 671 aaKnown RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 PEX11BO96011 259 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms