RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 OR5T3Q8NGG3 340 aa13.48□□□□□ -0.25
SMARCE1-205ENST00000431889 OR51Q1Q8NH59 317 aa13.48□□□□□ -0.25
SMARCE1-205ENST00000431889 MARVELD3Q96A59 401 aa13.48□□□□□ -0.25
SMARCE1-205ENST00000431889 PYCR2Q96C36 320 aa13.48□□□□□ -0.25
SMARCE1-205ENST00000431889 MOCOSQ96EN8 888 aa13.48□□□□□ -0.25
SMARCE1-205ENST00000431889 PWWP2AQ96N64 755 aa13.48□□□□□ -0.25
SMARCE1-205ENST00000431889 AARSD1Q9BTE6 412 aaKnown RBP13.48□□□□□ -0.25
SMARCE1-205ENST00000431889 UNKQ9C0B0 810 aaKnown RBP13.48□□□□□ -0.25
SMARCE1-205ENST00000431889 KLHL1Q9NR64 748 aa13.48□□□□□ -0.25
SMARCE1-205ENST00000431889 C14orf105Q9NVL8 296 aa13.48□□□□□ -0.25
SMARCE1-205ENST00000431889 RIC8BQ9NVN3 520 aa13.48□□□□□ -0.25
SMARCE1-205ENST00000431889 STMN3Q9NZ72 180 aa13.48□□□□□ -0.25
SMARCE1-205ENST00000431889 PDE10AQ9Y233 779 aa13.48□□□□□ -0.25
SMARCE1-205ENST00000431889 MYO9AB2RTY4 2548 aa13.48□□□□□ -0.25
SMARCE1-205ENST00000431889 PRPF4O43172 522 aaKnown RBP eCLIP13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 MPC1LP0DKB6 136 aa13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 CDH1P12830 882 aa13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 MAGEA6P43360 314 aa13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 XCR1P46094 333 aa13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 CDKN2DP55273 166 aa13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 CSNK1G2P78368 415 aa13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 NAE1Q13564 534 aa13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 PHKG1Q16816 387 aa13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 SP5Q6BEB4 398 aaPredicted RBP13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 PAQR3Q6TCH7 311 aa13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 TMEM205Q6UW68 189 aa13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 SLC26A11Q86WA9 606 aa13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 PDSS2Q86YH6 399 aa13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 COG1Q8WTW3 980 aa13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 KCNJ9Q92806 393 aa13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 HAS2Q92819 552 aa13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 MVB12AQ96EY5 273 aa13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 PEX11GQ96HA9 241 aa13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 SIGLEC10Q96LC7 697 aa13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 IMMP1LQ96LU5 166 aa13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 CYTH2Q99418 400 aa13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 TGIF2Q9GZN2 237 aa13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 CCDC177Q9NQR7 707 aaPredicted RBP13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 HOMER3Q9NSC5 361 aa13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 NEU2Q9Y3R4 380 aa13.47□□□□□ -0.25
SMARCE1-205ENST00000431889 LOC102723996A0A087X1L8 192 aa13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 TRAV17A0A0B4J275 112 aa13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 ZNF839A8K0R7 811 aa13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 FAM227AF5H4B4 570 aa13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 RASAL1O95294 804 aa13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 SERPIND1P05546 499 aa13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 STSP08842 583 aa13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 GABRB3P28472 473 aa13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 SKIV2L2P42285 1042 aaKnown RBP13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 NAA25Q14CX7 972 aa13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 ZXDCQ2QGD7 858 aaPredicted RBP13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 MSS51Q4VC12 460 aa13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 ABHD17BQ5VST6 288 aa13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 GARNL3Q5VVW2 1013 aa13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 NCCRP1Q6ZVX7 275 aaPredicted RBP13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 CPEB2Q7Z5Q1 589 aaKnown RBP13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 BEST3Q8N1M1 668 aa13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 NAT8LQ8N9F0 302 aa13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 METTL21AQ8WXB1 218 aa13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 NR4A3Q92570 626 aa13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 TSLPQ969D9 159 aa13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 LINGO1Q96FE5 620 aa13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 SIGLEC12Q96PQ1 595 aa13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 UTP6Q9NYH9 597 aaKnown RBP13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 TRMT6Q9UJA5 497 aaKnown RBP13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 VPS9D1Q9Y2B5 631 aa13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 NAALAD2Q9Y3Q0 740 aa13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 FBN2P35556 2912 aa13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 CREBBPQ92793 2442 aa13.46□□□□□ -0.25
SMARCE1-205ENST00000431889 CTAGE15A4D2H0 777 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 OR5H15A6NDH6 313 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 PCDH17O14917 1159 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 NRDCO43847 1150 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 HSD17B2P37059 387 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 EMP3P54852 163 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 ABATP80404 500 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 DHX9Q08211 1270 aaKnown RBP13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 NDUFA9Q16795 377 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 TMEM214Q6NUQ4 689 aaKnown RBP13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 RPUSD3Q6P087 351 aaKnown RBP13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 AGTRAPQ6RW13 159 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 ANKRD37Q7Z713 158 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 CTAGE6Q86UF2 777 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 IGDCC3Q8IVU1 814 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 RASGEF1CQ8N431 466 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 ZNF740Q8NDX6 193 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 NPAS2Q99743 824 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 SPNS1Q9H2V7 528 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 KCNK13Q9HB14 408 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 XAB2Q9HCS7 855 aaKnown RBP13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 TMEM184CQ9NVA4 438 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 COPG2Q9UBF2 871 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 SEC14L3Q9UDX4 400 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 IKZF3Q9UKT9 509 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 CCL21O00585 134 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 PHF2O75151 1096 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 GUCA1CO95843 209 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 MLNP12872 115 aa13.45□□□□□ -0.26
SMARCE1-205ENST00000431889 HNF4AP41235 474 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms