RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 DISP3Q9P2K9 1392 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 IGLV7-46A0A075B6I9 117 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 TRAV18A0A075B6X5 111 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 A0A087WUV0 522 aaPredicted RBP1.88□□□□□ -2.11
CDC40-204ENST00000431461 C13orf42A0A1B0GVH6 325 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 C5orf52A6NGY3 159 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 MSGN1A6NI15 193 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 C17orf105B2RV13 164 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 KBTBD13C9JR72 458 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 NR5A2O00482 541 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 TRAFD1O14545 582 aaPredicted RBP1.88□□□□□ -2.11
CDC40-204ENST00000431461 SURF4O15260 269 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 SPRY1O43609 319 aaPredicted RBP1.88□□□□□ -2.11
CDC40-204ENST00000431461 FCGR3BO75015 233 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 CLN5O75503 358 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 GSRP00390 522 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 GPIP06744 558 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 C8orf89P0DMQ9 161 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 MYOGP15173 224 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 ZNF26P17031 533 aaPredicted RBP1.88□□□□□ -2.11
CDC40-204ENST00000431461 RPL35AP18077 110 aaKnown RBP1.88□□□□□ -2.11
CDC40-204ENST00000431461 LHCGRP22888 699 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 TIA1P31483 386 aaKnown RBP eCLIP1.88□□□□□ -2.11
CDC40-204ENST00000431461 FRKP42685 505 aaPredicted RBP1.88□□□□□ -2.11
CDC40-204ENST00000431461 PAX9P55771 341 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 GSCP56915 257 aaPredicted RBP1.88□□□□□ -2.11
CDC40-204ENST00000431461 LINC01547P58512 204 aaPredicted RBP1.88□□□□□ -2.11
CDC40-204ENST00000431461 DCDC1P59894 354 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 KRTAP12-2P59991 146 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 STX1BP61266 288 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 ERVK-16P61578 105 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 HNRNPKP61978 463 aaKnown RBP eCLIP1.88□□□□□ -2.11
CDC40-204ENST00000431461 ARHGAP1Q07960 439 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 HNRNPDQ14103 355 aaKnown RBP1.88□□□□□ -2.11
CDC40-204ENST00000431461 GRB14Q14449 540 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 HERC3Q15034 1050 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 TYSND1Q2T9J0 566 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 ZFP69Q49AA0 526 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 LACTB2Q53H82 288 aaPredicted RBP1.88□□□□□ -2.11
CDC40-204ENST00000431461 FFAR4Q5NUL3 377 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 FAM53AQ6NSI3 398 aaPredicted RBP1.88□□□□□ -2.11
CDC40-204ENST00000431461 TTC27Q6P3X3 843 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 DCLRE1AQ6PJP8 1040 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 SLC25A47Q6Q0C1 308 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 LEKR1Q6ZMV7 388 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 C15orf52Q6ZUT6 534 aaKnown RBP1.88□□□□□ -2.11
CDC40-204ENST00000431461 SLC24A5Q71RS6 500 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 ANKRD46Q86W74 232 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 MEX3DQ86XN8 651 aaKnown RBP1.88□□□□□ -2.11
CDC40-204ENST00000431461 SPAG16Q8N0X2 631 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 CLYBLQ8N0X4 340 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 SIX6OS1Q8N1H7 587 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 CIARTQ8N365 385 aaPredicted RBP1.88□□□□□ -2.11
CDC40-204ENST00000431461 ZNF614Q8N883 585 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 GBP7Q8N8V2 638 aaPredicted RBP1.88□□□□□ -2.11
CDC40-204ENST00000431461 OR4C15Q8NGM1 316 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 OR2T11Q8NH01 316 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 ZFAND2BQ8WV99 257 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 HEXDCQ8WVB3 486 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 PIGBQ92521 554 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 PIK3R3Q92569 461 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 TEKT1Q969V4 418 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 ATP6V1E2Q96A05 226 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 EEF2KMTQ96G04 330 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 CFAP36Q96G28 342 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 VMP1Q96GC9 406 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 LURAP1Q96LR2 239 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 C10orf90Q96M02 699 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 LINC00479Q96M42 142 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 GDAP1L1Q96MZ0 367 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 LITAFQ99732 161 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 C17orf62Q9BQA9 187 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 ATG101Q9BSB4 218 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 DCTN5Q9BTE1 182 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 KATNB1Q9BVA0 655 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 CLEC7AQ9BXN2 247 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 DNAI2Q9GZS0 605 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 NAPBQ9H115 298 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 PANK3Q9H999 370 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 COPS7BQ9H9Q2 264 aaPredicted RBP1.88□□□□□ -2.11
CDC40-204ENST00000431461 LMAN1LQ9HAT1 526 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 DNAJC4Q9NNZ3 241 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 ZCCHC17Q9NP64 241 aaKnown RBP1.88□□□□□ -2.11
CDC40-204ENST00000431461 GPR173Q9NS66 373 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 IARS2Q9NSE4 1012 aaKnown RBP1.88□□□□□ -2.11
CDC40-204ENST00000431461 ABCB8Q9NUT2 735 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 TBC1D13Q9NVG8 400 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 TEX10Q9NXF1 929 aaPredicted RBP1.88□□□□□ -2.11
CDC40-204ENST00000431461 NDE1Q9NXR1 346 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 MIS18AQ9NYP9 233 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 EPHA6Q9UF33 1036 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 ARMCX3Q9UH62 379 aaPredicted RBP1.88□□□□□ -2.11
CDC40-204ENST00000431461 FBXL5Q9UKA1 691 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 RNF150Q9ULK6 438 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 NOL7Q9UMY1 257 aaKnown RBP1.88□□□□□ -2.11
CDC40-204ENST00000431461 RUVBL2Q9Y230 463 aaKnown RBP1.88□□□□□ -2.11
CDC40-204ENST00000431461 EXOGQ9Y2C4 368 aaKnown RBP1.88□□□□□ -2.11
CDC40-204ENST00000431461 WIPI2Q9Y4P8 454 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 RIPK3Q9Y572 518 aa1.88□□□□□ -2.11
CDC40-204ENST00000431461 PRSS21Q9Y6M0 314 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms