RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 CDKL4Q5MAI5 379 aa9.33□□□□□ -0.92
HDAC6-207ENST00000430858 TMEM214Q6NUQ4 689 aaKnown RBP9.33□□□□□ -0.92
HDAC6-207ENST00000430858 RAPH1Q70E73 1250 aa9.33□□□□□ -0.92
HDAC6-207ENST00000430858 ASPGQ86U10 573 aa9.33□□□□□ -0.92
HDAC6-207ENST00000430858 THOC6Q86W42 341 aaKnown RBP9.33□□□□□ -0.92
HDAC6-207ENST00000430858 TCAIMQ8N3R3 496 aa9.33□□□□□ -0.92
HDAC6-207ENST00000430858 CEP112Q8N8E3 955 aa9.33□□□□□ -0.92
HDAC6-207ENST00000430858 AMER3Q8N944 861 aa9.33□□□□□ -0.92
HDAC6-207ENST00000430858 TEX19Q8NA77 164 aa9.33□□□□□ -0.92
HDAC6-207ENST00000430858 MFSD9Q8NBP5 474 aa9.33□□□□□ -0.92
HDAC6-207ENST00000430858 FDCSPQ8NFU4 85 aa9.33□□□□□ -0.92
HDAC6-207ENST00000430858 SLC13A3Q8WWT9 602 aa9.33□□□□□ -0.92
HDAC6-207ENST00000430858 NEIL2Q969S2 332 aa9.33□□□□□ -0.92
HDAC6-207ENST00000430858 RHBDF1Q96CC6 855 aa9.33□□□□□ -0.92
HDAC6-207ENST00000430858 TM4SF19Q96DZ7 209 aa9.33□□□□□ -0.92
HDAC6-207ENST00000430858 MMABQ96EY8 250 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-207ENST00000430858 UBXN10Q96LJ8 280 aa9.33□□□□□ -0.92
HDAC6-207ENST00000430858 FMO2Q99518 471 aa9.33□□□□□ -0.92
HDAC6-207ENST00000430858 CRB3Q9BUF7 120 aa9.33□□□□□ -0.92
HDAC6-207ENST00000430858 TGIF2Q9GZN2 237 aa9.33□□□□□ -0.92
HDAC6-207ENST00000430858 PELI2Q9HAT8 420 aa9.33□□□□□ -0.92
HDAC6-207ENST00000430858 MKKSQ9NPJ1 570 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-207ENST00000430858 ATP13A2Q9NQ11 1180 aa9.33□□□□□ -0.92
HDAC6-207ENST00000430858 GPR83Q9NYM4 423 aa9.33□□□□□ -0.92
HDAC6-207ENST00000430858 TRPC4Q9UBN4 977 aa9.33□□□□□ -0.92
HDAC6-207ENST00000430858 SLC22A14Q9Y267 594 aa9.33□□□□□ -0.92
HDAC6-207ENST00000430858 HS3ST3B1Q9Y662 390 aa9.33□□□□□ -0.92
HDAC6-207ENST00000430858 FER1L5A0AVI2 2057 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 A6NL46 340 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 SOCS6O14544 535 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 PCDH17O14917 1159 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 OR1F1O43749 312 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 LCMT2O60294 686 aaKnown RBP9.32□□□□□ -0.92
HDAC6-207ENST00000430858 FAM155BO75949 473 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 NSA2O95478 260 aaKnown RBP9.32□□□□□ -0.92
HDAC6-207ENST00000430858 PDGFAP04085 211 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 SOX8P57073 446 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 KLC1Q07866 573 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 AIMP2Q13155 320 aaKnown RBP9.32□□□□□ -0.92
HDAC6-207ENST00000430858 PWP1Q13610 501 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 SLMAPQ14BN4 828 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 EFTUD2Q15029 972 aaKnown RBP eCLIP9.32□□□□□ -0.924e-8■■■■■ 45
HDAC6-207ENST00000430858 RBBP7Q16576 425 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 VWA2Q5GFL6 755 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 CATSPEREQ5SY80 951 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 SULT1C3Q6IMI6 304 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 NXPE4Q6UWF7 544 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 KIRREL2Q6UWL6 708 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 SHISA6Q6ZSJ9 500 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 CCDC91Q7Z6B0 441 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 TMPRSS11BQ86T26 416 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 TBC1D1Q86TI0 1168 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-207ENST00000430858 GPSM1Q86YR5 675 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 TMEM151BQ8IW70 566 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 KLHDC8AQ8IYD2 350 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 SPATA6LQ8N4H0 392 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 STAG3L4Q8TBR4 150 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 IFT81Q8WYA0 676 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 KIAA1191Q96A73 305 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 TSNARE1Q96NA8 513 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 CYTH2Q99418 400 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 SMAD5Q99717 465 aaKnown RBP9.32□□□□□ -0.92
HDAC6-207ENST00000430858 AIF1LQ9BQI0 150 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 NUDT9Q9BW91 350 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 YIPF2Q9BWQ6 316 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 CAPS2Q9BXY5 557 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 UNKQ9C0B0 810 aaKnown RBP9.32□□□□□ -0.92
HDAC6-207ENST00000430858 CNOT10Q9H9A5 744 aaKnown RBP9.32□□□□□ -0.92
HDAC6-207ENST00000430858 NINJ2Q9NZG7 142 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 C5AR2Q9P296 337 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 ZFP69BQ9UJL9 534 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 C3orf18Q9UK00 162 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 FBXL4Q9UKA2 621 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 SLC22A7Q9Y694 548 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 PCM1Q15154 2024 aa9.32□□□□□ -0.92
HDAC6-207ENST00000430858 NCF1BA6NI72 391 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-207ENST00000430858 NCF1CA8MVU1 366 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-207ENST00000430858 IDSB3KWA1 339 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 NDUFS4O43181 175 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 DPM1O60762 260 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 IPO13O94829 963 aaKnown RBP9.31□□□□□ -0.92
HDAC6-207ENST00000430858 WDR47O94967 919 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 STATHP02808 62 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 ALPPP05187 535 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 LTA4HP09960 611 aaKnown RBP9.31□□□□□ -0.92
HDAC6-207ENST00000430858 SLC35E2BP0CK96 405 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 NCF1P14598 390 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-207ENST00000430858 IL1RNP18510 177 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 GNAZP19086 355 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 CXCR2P25025 360 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 AHRP35869 848 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 GGT5P36269 586 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 SCTRP47872 440 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 SLC6A12P48065 614 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 EMP2P54851 167 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 REEP5Q00765 189 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 MEF2AQ02078 507 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-207ENST00000430858 TLE1Q04724 770 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 RGS1Q08116 209 aa9.31□□□□□ -0.92
HDAC6-207ENST00000430858 MYBPC3Q14896 1274 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms