RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 KCNE1BA0A087WTH5 132 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 FEZF1A0PJY2 475 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 ANKDD1BA6NHY2 528 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 H0YIV9 168 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 PLD2O14939 933 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 NDUFS4O43181 175 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 NRP2O60462 931 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 SRPX2O60687 465 aaPredicted RBP10.53□□□□□ -0.72
CHD4-202ENST00000430771 CHEK2O96017 543 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 PCNAP12004 261 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 CD22P20273 847 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 HOXD11P31277 338 aaPredicted RBP10.53□□□□□ -0.72
CHD4-202ENST00000430771 BCL6P41182 706 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 ITGA1P56199 1179 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 FOXM1Q08050 763 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 KCNAB1Q14722 419 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 ZRSR2Q15696 482 aaKnown RBP10.53□□□□□ -0.72
CHD4-202ENST00000430771 CPSF6Q16630 551 aaKnown RBP eCLIP10.53□□□□□ -0.721e-9■■□□□ 11.4
CHD4-202ENST00000430771 ARL13AQ5H913 290 aaPredicted RBP10.53□□□□□ -0.72
CHD4-202ENST00000430771 C3orf38Q5JPI3 329 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 SYVN1Q86TM6 617 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 BPHLQ86WA6 291 aaPredicted RBP10.53□□□□□ -0.72
CHD4-202ENST00000430771 PLD3Q8IV08 490 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 LAS2Q8IYD9 372 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 GPR135Q8IZ08 494 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 DNAJC22Q8N4W6 341 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 CSNK1A1LQ8N752 337 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 CDYL2Q8N8U2 506 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 TRPV3Q8NET8 790 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 CCT6BQ92526 530 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 TEFMQ96QE5 360 aaKnown RBP10.53□□□□□ -0.72
CHD4-202ENST00000430771 OR6C1Q96RD1 312 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 CENPKQ9BS16 269 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 FAM60AQ9NP50 221 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 FGF21Q9NSA1 209 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 THAP1Q9NVV9 213 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 ZFP69BQ9UJL9 534 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 PILRAQ9UKJ1 303 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 RNF11Q9Y3C5 154 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 RAP2CQ9Y3L5 183 aa10.53□□□□□ -0.72
CHD4-202ENST00000430771 URADA6NGE7 173 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 FFAR3O14843 346 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 AZIN1O14977 448 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 GPR42O15529 346 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 ZSCAN9O15535 394 aaPredicted RBP10.52□□□□□ -0.73
CHD4-202ENST00000430771 PRAMEF10O60809 474 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 PRAMEF4O60810 478 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 SNNO75324 88 aaPredicted RBP10.52□□□□□ -0.73
CHD4-202ENST00000430771 CLEC3AO75596 197 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 OR2B3O76000 313 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 CAPN1P07384 714 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 CHRNGP07510 517 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 UROSP10746 265 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 FOLR1P15328 257 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 PIK3CBP42338 1070 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 CCR10P46092 362 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 GABRA4P48169 554 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 VSX2P58304 361 aaPredicted RBP10.52□□□□□ -0.73
CHD4-202ENST00000430771 ERVPABLB-1P60509 514 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 SH3BP2P78314 561 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 CYP4F2P78329 520 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 ZNF33BQ06732 778 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 FOXC1Q12948 553 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 TARDBPQ13148 414 aaKnown RBP eCLIP10.52□□□□□ -0.73
CHD4-202ENST00000430771 PWP1Q13610 501 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 IL11RAQ14626 422 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 GRM7Q14831 915 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 GPR19Q15760 415 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 SH2D4BQ5SQS7 431 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 YOD1Q5VVQ6 348 aaPredicted RBP10.52□□□□□ -0.73
CHD4-202ENST00000430771 PRAMEF9Q5VWM5 478 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 FRG2Q64ET8 278 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 TLDC1Q6P9B6 456 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 CEACAM20Q6UY09 585 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 RGS9BPQ6ZS82 235 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 DGLUCYQ7Z3D6 616 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 PPP1R3BQ86XI6 285 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 MCATQ8IVS2 390 aaKnown RBP10.52□□□□□ -0.73
CHD4-202ENST00000430771 BMPERQ8N8U9 685 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 METTL6Q8TCB7 284 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 CKAP2Q8WWK9 683 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 SELENOMQ8WWX9 145 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 ZNF75CPQ92670 426 aaPredicted RBP10.52□□□□□ -0.73
CHD4-202ENST00000430771 ZNF501Q96CX3 271 aaPredicted RBP10.52□□□□□ -0.73
CHD4-202ENST00000430771 MOCOSQ96EN8 888 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 FAR2Q96K12 515 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 ZNF285Q96NJ3 590 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 FCRL4Q96PJ5 515 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 FRG2BQ96QU4 278 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 OR2A5Q96R48 311 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 ZPBPQ9BS86 351 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 ILKAPQ9H0C8 392 aaPredicted RBP10.52□□□□□ -0.73
CHD4-202ENST00000430771 RHBGQ9H310 441 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 OCIAD1Q9NX40 245 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 PISDQ9UG56 409 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 SERTAD3Q9UJW9 196 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 SRPK3Q9UPE1 567 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.52□□□□□ -0.73
CHD4-202ENST00000430771 PCDHGA8Q9Y5G5 932 aa10.52□□□□□ -0.73
CHD4-202ENST00000430771 AP1M2Q9Y6Q5 423 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms