RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 ZNF648Q5T619 568 aaPredicted RBP9.66□□□□□ -0.86
ATG4B-212ENST00000430617 PTRHD1Q6GMV3 140 aaKnown RBP9.66□□□□□ -0.86
ATG4B-212ENST00000430617 XKRXQ6PP77 449 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 FAM180AQ6UWF9 173 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 RPTNQ6XPR3 784 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 RAPH1Q70E73 1250 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 ADGRG6Q86SQ4 1221 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 BPHLQ86WA6 291 aaPredicted RBP9.66□□□□□ -0.86
ATG4B-212ENST00000430617 RAB43Q86YS6 212 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 RASGEF1AQ8N9B8 481 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 SPATA3Q8NHX4 192 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 DNAJB14Q8TBM8 379 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 PPP4R1Q8TF05 950 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 FAM136AQ96C01 138 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 LRFN5Q96NI6 719 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 FAM111AQ96PZ2 611 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 MAP3K3Q99759 626 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 SMR3AQ99954 134 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 ZCCHC2Q9C0B9 1178 aaKnown RBP9.66□□□□□ -0.86
ATG4B-212ENST00000430617 RAB33BQ9H082 229 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 CXXC4Q9H2H0 198 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 CCDC134Q9H6E4 229 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 GPAMQ9HCL2 828 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 KCNK9Q9NPC2 374 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 ZNF358Q9NW07 568 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 NKIRAS1Q9NYS0 192 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 TMEM216Q9P0N5 145 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 KLHL42Q9P2K6 505 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 EPHA6Q9UF33 1036 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 DCDC2Q9UHG0 476 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 TRMT6Q9UJA5 497 aaKnown RBP9.66□□□□□ -0.86
ATG4B-212ENST00000430617 ACOT9Q9Y305 439 aa9.66□□□□□ -0.86
ATG4B-212ENST00000430617 TARM1B6A8C7 271 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 QSOX1O00391 747 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 SHOX2O60902 331 aaPredicted RBP9.65□□□□□ -0.86
ATG4B-212ENST00000430617 SLC25A14O95258 325 aaPredicted RBP9.65□□□□□ -0.86
ATG4B-212ENST00000430617 LTA4HP09960 611 aaKnown RBP9.65□□□□□ -0.86
ATG4B-212ENST00000430617 OR56A5P0C7T3 313 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 RALBP11234 206 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 CD1DP15813 335 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 MSH3P20585 1137 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 DNAJA1P31689 397 aaKnown RBP9.65□□□□□ -0.86
ATG4B-212ENST00000430617 MDH1P40925 334 aaKnown RBP9.65□□□□□ -0.86
ATG4B-212ENST00000430617 CA7P43166 264 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 CCT5P48643 541 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 SOX8P57073 446 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 FOXL2P58012 376 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 CSNK1G2P78368 415 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 GUCY1A3Q02108 690 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 PCLAFQ15004 111 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 NCF4Q15080 339 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 SEPT7Q16181 437 aaKnown RBP9.65□□□□□ -0.86
ATG4B-212ENST00000430617 PTCHD3Q3KNS1 767 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 LRRC8EQ6NSJ5 796 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 PAQR3Q6TCH7 311 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 DET1Q7L5Y6 550 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 TBC1D1Q86TI0 1168 aaPredicted RBP9.65□□□□□ -0.86
ATG4B-212ENST00000430617 CPNE9Q8IYJ1 553 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 SYTL1Q8IYJ3 562 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 D2HGDHQ8N465 521 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 TMEM151AQ8N4L1 468 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 AVL9Q8NBF6 648 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 ACBD4Q8NC06 268 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 GDAP1Q8TB36 358 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 MGARPQ8TDB4 240 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 NXNL1Q96CM4 212 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 DCUN1D1Q96GG9 259 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 CNDP1Q96KN2 507 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 FER1L6-AS2Q96M78 137 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 PANX3Q96QZ0 392 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 SPOCK3Q9BQ16 436 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 DERL2Q9GZP9 239 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 IQCGQ9H095 443 aaKnown RBP9.65□□□□□ -0.86
ATG4B-212ENST00000430617 ENKD1Q9H0I2 346 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 OSGEPL1Q9H4B0 414 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 SLC40A1Q9NP59 571 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 INTS9Q9NV88 658 aaKnown RBP9.65□□□□□ -0.86
ATG4B-212ENST00000430617 ATXN10Q9UBB4 475 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 XPR1Q9UBH6 696 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 SLC23A2Q9UGH3 650 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 IKZF3Q9UKT9 509 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 DHRS7Q9Y394 339 aa9.65□□□□□ -0.86
ATG4B-212ENST00000430617 ATRQ13535 2644 aa9.65□□□□□ -0.87
ATG4B-212ENST00000430617 OR2AG2A6NM03 316 aa9.64□□□□□ -0.87
ATG4B-212ENST00000430617 OR52A4PA6NMU1 304 aa9.64□□□□□ -0.87
ATG4B-212ENST00000430617 E5RI56 91 aa9.64□□□□□ -0.87
ATG4B-212ENST00000430617 EIF3FO00303 357 aaPredicted RBP9.64□□□□□ -0.87
ATG4B-212ENST00000430617 CHUKO15111 745 aa9.64□□□□□ -0.87
ATG4B-212ENST00000430617 VEGFDO43915 354 aa9.64□□□□□ -0.87
ATG4B-212ENST00000430617 ALOX12BO75342 701 aa9.64□□□□□ -0.87
ATG4B-212ENST00000430617 FTH1P02794 183 aa9.64□□□□□ -0.87
ATG4B-212ENST00000430617 CCDC166P0CW27 439 aa9.64□□□□□ -0.87
ATG4B-212ENST00000430617 ZNF8P17098 575 aaPredicted RBP9.64□□□□□ -0.87
ATG4B-212ENST00000430617 CHRM3P20309 590 aa9.64□□□□□ -0.87
ATG4B-212ENST00000430617 AOAHP28039 575 aa9.64□□□□□ -0.87
ATG4B-212ENST00000430617 CCR7P32248 378 aa9.64□□□□□ -0.87
ATG4B-212ENST00000430617 SKIV2L2P42285 1042 aaKnown RBP9.64□□□□□ -0.87
ATG4B-212ENST00000430617 SERPINB4P48594 390 aa9.64□□□□□ -0.87
ATG4B-212ENST00000430617 KPNA2P52292 529 aaKnown RBP9.64□□□□□ -0.87
ATG4B-212ENST00000430617 HSD11B2P80365 405 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms