RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 PRSS48Q7RTY5 328 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 TEX26Q8N6G2 289 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 AQP11Q8NBQ7 271 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 MGLLQ99685 303 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 TVP23BQ9NYZ1 205 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 COMMD3Q9UBI1 195 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 SSR3Q9UNL2 185 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 UPK1AO00322 258 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 PCDHGA12O60330 932 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 HTR1AP08908 422 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 HMGCLP35914 325 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 PREPP48147 710 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 STK19P49842 368 aaPredicted RBP13.3□□□□□ -0.28
SGMS1-203ENST00000429490 TIAL1Q01085 375 aaKnown RBP eCLIP13.3□□□□□ -0.28
SGMS1-203ENST00000429490 RTP2Q5QGT7 225 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 LRRC66Q68CR7 880 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 GTF2IRD2BQ6EKJ0 949 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 GTF2IRD2Q86UP8 949 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 SERINC5Q86VE9 423 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 GALNT12Q8IXK2 581 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 PTPN18Q99952 460 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 IL1RAPQ9NPH3 570 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 TBC1D14Q9P2M4 693 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 OARD1Q9Y530 152 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 A0A0G2JN53 185 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 ZNF623O75123 536 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 CLCN4P51793 760 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 KRT33BQ14525 404 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 PLET1Q6UQ28 207 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 ZNF517Q6ZMY9 492 aaPredicted RBP13.3□□□□□ -0.28
SGMS1-203ENST00000429490 AUTS2Q8WXX7 1259 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 FCGR1BQ92637 280 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 COQ7Q99807 217 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 OR51B5Q9H339 312 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 PAQR5Q9NXK6 330 aaPredicted RBP13.3□□□□□ -0.28
SGMS1-203ENST00000429490 ANKMY1Q9P2S6 941 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 CACNA1CQ13936 2221 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 KPNA3O00505 521 aaPredicted RBP13.3□□□□□ -0.28
SGMS1-203ENST00000429490 PLOD3O60568 738 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 PRLP01236 227 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 GSTM5P46439 218 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 MASP1P48740 699 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 CLCN7P51798 805 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 SNRPD1P62314 119 aaKnown RBP13.3□□□□□ -0.28
SGMS1-203ENST00000429490 PPIGQ13427 754 aaKnown RBP eCLIP13.3□□□□□ -0.28
SGMS1-203ENST00000429490 EXOC3L2Q2M3D2 409 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 IQCCQ4KMZ1 466 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 GCNT6Q5T4J0 391 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 NEK5Q6P3R8 708 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 TRIM40Q6P9F5 258 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 SLC16A12Q6ZSM3 486 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 RFLNAQ6ZTI6 216 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 NAGSQ8N159 534 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 NXPE1Q8N323 547 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 ZNF366Q8N895 744 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 PHOX2BQ99453 314 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 DOK1Q99704 481 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 SLC30A2Q9BRI3 323 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 TMEM246Q9BRR3 403 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 SLC35A5Q9BS91 424 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 CENPOQ9BU64 300 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 CACYBPQ9HB71 228 aaKnown RBP13.3□□□□□ -0.28
SGMS1-203ENST00000429490 MED16Q9Y2X0 877 aa13.3□□□□□ -0.28
SGMS1-203ENST00000429490 CPNE3O75131 537 aaKnown RBP13.29□□□□□ -0.28
SGMS1-203ENST00000429490 TSPAN12O95859 305 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 BPIP17213 487 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 PTNP21246 168 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 SUOXP51687 545 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 TUBA1BP68363 451 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 CNTN1Q12860 1018 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 ELAVL2Q12926 359 aaKnown RBP13.29□□□□□ -0.28
SGMS1-203ENST00000429490 TBRG1Q3YBR2 411 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 ATP13A5Q4VNC0 1218 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 ZNF544Q6NX49 715 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 SERPINA13PQ6UXR4 307 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 USP30Q70CQ3 517 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 TUBA1AQ71U36 451 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 GALNT7Q86SF2 657 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 XAGE5Q8WWM1 108 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 OTUB1Q96FW1 271 aaPredicted RBP13.29□□□□□ -0.28
SGMS1-203ENST00000429490 COL21A1Q96P44 957 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 ASPNQ9BXN1 380 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 CLMPQ9H6B4 373 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 ATP6V1HQ9UI12 483 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 CLEC4AQ9UMR7 237 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 RUVBL1Q9Y265 456 aaKnown RBP13.29□□□□□ -0.28
SGMS1-203ENST00000429490 MRPS7Q9Y2R9 242 aaKnown RBP13.29□□□□□ -0.28
SGMS1-203ENST00000429490 PCDHGB6Q9Y5F9 930 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 LTBP4Q8N2S1 1624 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 PCDH7O60245 1069 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 B4GALT3O60512 393 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 FHP07954 510 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 RYKP34925 604 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 RPS26P62854 115 aaKnown RBP13.29□□□□□ -0.28
SGMS1-203ENST00000429490 IFITM3Q01628 133 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 SCARB2Q14108 478 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 RNASE12Q5GAN4 147 aaKnown RBP13.29□□□□□ -0.28
SGMS1-203ENST00000429490 RGMBQ6NW40 437 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 DTX3Q8N9I9 347 aa13.29□□□□□ -0.28
SGMS1-203ENST00000429490 PCSK9Q8NBP7 692 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms