RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 SQSTM1Q13501 440 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 ABRAXAS2Q15018 415 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 C10orf62Q5T681 223 aaPredicted RBP7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 FCRL6Q6DN72 434 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 TMEM71Q6P5X7 295 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 RBM44Q6ZP01 1051 aaKnown RBP7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 RNF44Q7L0R7 432 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 KMT5CQ86Y97 462 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 LAS2Q8IYD9 372 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 CHCHD4Q8N4Q1 142 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 MFSD9Q8NBP5 474 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 TTLQ8NG68 377 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 OR4K1Q8NGD4 311 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 RFWD2Q8NHY2 731 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 HUS1BQ8NHY5 278 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 WDR48Q8TAF3 677 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 ZUFSPQ96AP4 578 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 FCRL4Q96PJ5 515 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 ZFYVE21Q9BQ24 234 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 NUF2Q9BZD4 464 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 PITHD1Q9GZP4 211 aaPredicted RBP7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 EPN3Q9H201 632 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 ZNF768Q9H5H4 540 aaKnown RBP7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 PDE7BQ9NP56 450 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 DMRT3Q9NQL9 472 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 FARSBQ9NSD9 589 aaKnown RBP7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 RIC8BQ9NVN3 520 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 ZNF490Q9ULM2 529 aaPredicted RBP7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 SLC12A4Q9UP95 1085 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 PCDHGA4Q9Y5G9 962 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 KLK4Q9Y5K2 254 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 ADAMTS9Q9P2N4 1935 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 EP300Q09472 2414 aaPredicted RBP7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 ZFC3H1O60293 1989 aaKnown RBP7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 GOLGA8QA0A0J9YX86 632 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 ATP6AP2A0A1C7CYW4 349 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 GOLGA8OA6NCC3 632 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 ANKDD1BA6NHY2 528 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 SRRM3A6NNA2 597 aaPredicted RBP7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 GOLGA8NF8WBI6 632 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 NTN3O00634 580 aaPredicted RBP7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 TOX3O15405 576 aaPredicted RBP7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 NDUFS4O43181 175 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 RGS14O43566 566 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 SH3BGRLO75368 114 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 ATP6AP2O75787 350 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 TGDSO95455 350 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 PDYNP01213 254 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 EIF2S1P05198 315 aaKnown RBP7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 ANKRD34CP0C6C1 535 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 SLC35G6P0C7Q6 338 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 GSTM2P28161 218 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 AHRP35869 848 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 PIK3CBP42338 1070 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 NOVA1P51513 510 aaKnown RBP7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 RAP1GDS1P52306 607 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 VSX2P58304 361 aaPredicted RBP7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 RPS13P62277 151 aaKnown RBP7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 SIM1P81133 766 aaPredicted RBP7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 E2F1Q01094 437 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 HMGCS1Q01581 520 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 BTKQ06187 659 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 CSTF3Q12996 717 aaKnown RBP7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 E2F2Q14209 437 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 KCNAB1Q14722 419 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 NR6A1Q15406 480 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 GPR19Q15760 415 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 UGT3A2Q3SY77 523 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 ZC3H12BQ5HYM0 836 aaKnown RBP7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 TMTC4Q5T4D3 741 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 VWA5B1Q5TIE3 1220 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 NXNQ6DKJ4 435 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 FRMPD2BQ6IN97 320 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 CGB2Q6NT52 195 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 DHRS13Q6UX07 377 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 ZNF574Q6ZN55 896 aaPredicted RBP7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 ACAD11Q709F0 780 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 TMPRSS9Q7Z410 1059 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 MAVSQ7Z434 540 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 SPATA21Q7Z572 469 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 B3GNT8Q7Z7M8 397 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 GLRX5Q86SX6 157 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 ASPGQ86U10 573 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 MCATQ8IVS2 390 aaKnown RBP7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 SLITRK4Q8IW52 837 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 HOMEZQ8IX15 550 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 RNF175Q8N4F7 328 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 CSNK1A1LQ8N752 337 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 GBP7Q8N8V2 638 aaPredicted RBP7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 ANKRD53Q8N9V6 530 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 RCBTB1Q8NDN9 531 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 WDR20Q8TBZ3 569 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 USP7Q93009 1102 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 TUBGCP3Q96CW5 907 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 THAP11Q96EK4 314 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 SEC16BQ96JE7 1060 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 TMEM74Q96NL1 305 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 SERPINI1Q99574 410 aa7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 ELAC2Q9BQ52 826 aaKnown RBP7.57□□□□□ -1.2
HMGA1P4-201ENST00000428643 SIKE1Q9BRV8 207 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms