RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 TMEM246Q9BRR3 403 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 ENAMQ9NRM1 1142 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 NDRG2Q9UN36 371 aaKnown RBP14.09□□□□□ -0.15
PTPRU-204ENST00000428026 COQ4Q9Y3A0 265 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 PSAT1Q9Y617 370 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 C13orf42A0A1B0GVH6 325 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 OR7A10O76100 309 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 H1F0P07305 194 aaKnown RBP14.09□□□□□ -0.15
PTPRU-204ENST00000428026 PTNP21246 168 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 ARSFP54793 590 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 OXR1Q8N573 874 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 DTX3Q8N9I9 347 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 VPS29Q9UBQ0 182 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 A0A1W2PP18 115 aa14.08□□□□□ -0.15
PTPRU-204ENST00000428026 FPR1P21462 350 aa14.08□□□□□ -0.15
PTPRU-204ENST00000428026 MAP3K8P41279 467 aa14.08□□□□□ -0.15
PTPRU-204ENST00000428026 GRK1Q15835 563 aa14.08□□□□□ -0.15
PTPRU-204ENST00000428026 ODF4Q2M2E3 257 aa14.08□□□□□ -0.15
PTPRU-204ENST00000428026 SPANXN4Q5MJ08 99 aa14.08□□□□□ -0.15
PTPRU-204ENST00000428026 CEP68Q76N32 757 aa14.08□□□□□ -0.15
PTPRU-204ENST00000428026 C1orf52Q8N6N3 182 aaKnown RBP14.08□□□□□ -0.15
PTPRU-204ENST00000428026 OR4F6Q8NGB9 312 aa14.08□□□□□ -0.15
PTPRU-204ENST00000428026 GEMIN6Q8WXD5 167 aaKnown RBP14.08□□□□□ -0.15
PTPRU-204ENST00000428026 MOCOSQ96EN8 888 aa14.08□□□□□ -0.15
PTPRU-204ENST00000428026 AURKBQ96GD4 344 aaPredicted RBP14.08□□□□□ -0.15
PTPRU-204ENST00000428026 MIPEPQ99797 713 aa14.08□□□□□ -0.15
PTPRU-204ENST00000428026 CCDC106Q9BWC9 280 aa14.08□□□□□ -0.15
PTPRU-204ENST00000428026 HCN2Q9UL51 889 aa14.08□□□□□ -0.15
PTPRU-204ENST00000428026 COL16A1Q07092 1604 aaPredicted RBP14.08□□□□□ -0.16
PTPRU-204ENST00000428026 GATBO75879 557 aaKnown RBP14.08□□□□□ -0.16
PTPRU-204ENST00000428026 SLITRK5O94991 958 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 CYP27C1Q4G0S4 372 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 XKR4Q5GH76 650 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 SYNPOQ8N3V7 929 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 CPA6Q8N4T0 437 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 TTTY10Q9BZA0 68 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 FBXL3Q9UKT7 428 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 CDH7Q9ULB5 785 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 MEMO1Q9Y316 297 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 PPEF2O14830 753 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 ITGA10O75578 1167 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 CMPK1P30085 196 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 PSMA6P60900 246 aaKnown RBP14.08□□□□□ -0.16
PTPRU-204ENST00000428026 FAM76BQ5HYJ3 339 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 AMIGO1Q86WK6 493 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 FNDC8Q8TC99 324 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 UCK2Q9BZX2 261 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 NANSQ9NR45 359 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 HAS3O00219 553 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 MTX2O75431 263 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 LCN1P31025 176 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 C1QTNF8P60827 252 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 ARFRP1Q13795 201 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 ELMOD2Q8IZ81 293 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 RBM18Q96H35 190 aaKnown RBP14.08□□□□□ -0.16
PTPRU-204ENST00000428026 PAQR5Q9NXK6 330 aaPredicted RBP14.08□□□□□ -0.16
PTPRU-204ENST00000428026 ZNF510Q9Y2H8 683 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 PTPRJQ12913 1337 aa14.08□□□□□ -0.16
PTPRU-204ENST00000428026 ALS2Q96Q42 1657 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 A0A0U1RQF3 1178 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 C12orf71A8MTZ7 269 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 RNASEH2AO75792 299 aaKnown RBP14.07□□□□□ -0.16
PTPRU-204ENST00000428026 ALPIP09923 528 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 CD40LGP29965 261 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 ZNF423Q2M1K9 1284 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 TMEM44Q2T9K0 475 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 SIRPB2Q5JXA9 342 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 KIAA1614Q5VZ46 1190 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 PIAS4Q8N2W9 510 aaPredicted RBP14.07□□□□□ -0.16
PTPRU-204ENST00000428026 ZNF420Q8TAQ5 688 aaPredicted RBP14.07□□□□□ -0.16
PTPRU-204ENST00000428026 CLCA3PQ9Y6N3 262 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 ARFGEF2Q9Y6D5 1785 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 M0R233 179 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 TYROBPO43914 113 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 APODP05090 189 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 CD97P48960 835 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 AFF1P51825 1210 aaKnown RBP14.07□□□□□ -0.16
PTPRU-204ENST00000428026 PGDP52209 483 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 SLBPQ14493 270 aaKnown RBP eCLIP14.07□□□□□ -0.16
PTPRU-204ENST00000428026 THAP6Q8TBB0 222 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 TWNKQ96RR1 684 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 NTPCRQ9BSD7 190 aaKnown RBP14.07□□□□□ -0.16
PTPRU-204ENST00000428026 GTPBP2Q9BX10 602 aaKnown RBP14.07□□□□□ -0.16
PTPRU-204ENST00000428026 PIGVQ9NUD9 493 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 EVA1BQ9NVM1 165 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 INMT-MINDY4F8WBC2 141 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 KMOO15229 486 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 VIPP01282 170 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 STATHP02808 62 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 SLC35G6P0C7Q6 338 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 FGF3P11487 239 aaPredicted RBP14.07□□□□□ -0.16
PTPRU-204ENST00000428026 FOXM1Q08050 763 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 GPR68Q15743 365 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 PYHIN1Q6K0P9 492 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 DGLUCYQ7Z3D6 616 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 PLCZ1Q86YW0 608 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 OR2L2Q8NH16 312 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 PRR11Q96HE9 360 aaPredicted RBP14.07□□□□□ -0.16
PTPRU-204ENST00000428026 TM9SF2Q99805 663 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 ZNF700Q9H0M5 742 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms