RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 RNF38Q9H0F5 515 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 SLC27A5Q9Y2P5 690 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 OXSR1O95747 527 aaPredicted RBP14.05□□□□□ -0.16
PTPN13-203ENST00000427191 CSN2P05814 226 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 GAD2Q05329 585 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 ZNF792Q3KQV3 632 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 HAVCR2Q8TDQ0 301 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 SLC32A1Q9H598 525 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 GBE1Q04446 702 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 LRRC66Q68CR7 880 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 KIAA1161Q6NSJ0 714 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 ADGRA1Q86SQ6 560 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 CCM2Q9BSQ5 444 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 ASB6Q9NWX5 421 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 TRIM64BA6NI03 449 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 TULP2O00295 520 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 LRRTM2O43300 516 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 RHBDL3P58872 404 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 CHRFAM7AQ494W8 412 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 ARL9Q6T311 187 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 ZNF584Q8IVC4 421 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 PLA2G15Q8NCC3 412 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 TSNAXQ99598 290 aaKnown RBP14.05□□□□□ -0.16
PTPN13-203ENST00000427191 IL25Q9H293 177 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 GNG8Q9UK08 70 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 OAZ3Q9UMX2 235 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 HSPB11Q9Y547 144 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 TMEM14AQ9Y6G1 99 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 TMEM150BA6NC51 233 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 SSX4O60224 188 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 FKTNO75072 461 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 S1PR1P21453 382 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 ACTR1AP61163 376 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 SLC16A9Q7RTY1 509 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 GATA5Q9BWX5 397 aaPredicted RBP14.05□□□□□ -0.16
PTPN13-203ENST00000427191 SLC6A16Q9GZN6 736 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 MYO18AQ92614 2054 aaKnown RBP14.05□□□□□ -0.16
PTPN13-203ENST00000427191 A8MUI8 341 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 HPRP00739 348 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 DSC3Q14574 896 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 TMED4Q7Z7H5 227 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 SLC22A16Q86VW1 577 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 RPLP0P6Q8NHW5 317 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 GHRLQ9UBU3 117 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 ZNF550Q7Z398 422 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 TSPAN33Q86UF1 283 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 NUS1Q96E22 293 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 OR52B2Q96RD2 323 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 CPXM1Q96SM3 734 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 WDR18Q9BV38 432 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 ARHGEF28Q8N1W1 1705 aaKnown RBP14.05□□□□□ -0.16
PTPN13-203ENST00000427191 BTBD19C9JJ37 291 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 CLDN5O00501 218 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 MEIS2O14770 477 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 IFNGR1P15260 489 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 BMP6P22004 513 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 ATP4BP51164 291 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 MTPNP58546 118 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 ZNF33AQ06730 810 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 FRG2Q64ET8 278 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 KIF18BQ86Y91 864 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 FRG2BQ96QU4 278 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 CGREF1Q99674 301 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 HNRNPABQ99729 332 aaKnown RBP14.05□□□□□ -0.16
PTPN13-203ENST00000427191 TCEAL7Q9BRU2 100 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 TMED9Q9BVK6 235 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 MALT1Q9UDY8 824 aa14.05□□□□□ -0.16
PTPN13-203ENST00000427191 PLD2O14939 933 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 PPM1BO75688 479 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 KCNC4Q03721 635 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 RABL3Q5HYI8 236 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 ZSWIM9Q86XI8 627 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 FBXO15Q8NCQ5 510 aaPredicted RBP14.04□□□□□ -0.16
PTPN13-203ENST00000427191 PTGES2Q9H7Z7 377 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 ZCCHC3Q9NUD5 404 aaKnown RBP14.04□□□□□ -0.16
PTPN13-203ENST00000427191 ALDH3B2P48448 385 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 BEX3Q00994 111 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 TMEM220Q6QAJ8 160 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 LAS2Q8IYD9 372 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 CFAP52Q8N1V2 620 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 GLIS2Q9BZE0 524 aaPredicted RBP14.04□□□□□ -0.16
PTPN13-203ENST00000427191 TDP1Q9NUW8 608 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 OSER1Q9NX31 292 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 CYCSP99999 105 aaKnown RBP14.04□□□□□ -0.16
PTPN13-203ENST00000427191 ARL6IP1Q15041 203 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 ARSJQ5FYB0 599 aaPredicted RBP14.04□□□□□ -0.16
PTPN13-203ENST00000427191 CXCL17Q6UXB2 119 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 OTOP3Q7RTS5 596 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 OR51D1Q8NGF3 324 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 RAD9AQ99638 391 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 FOLH1BQ9HBA9 442 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 ASB3Q9Y575 518 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 MT-CO2P00403 227 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 AOC1P19801 751 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 TNFSF9P41273 254 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 TNFAIP8L2Q6P589 184 aaPredicted RBP14.04□□□□□ -0.16
PTPN13-203ENST00000427191 PRDM4Q9UKN5 801 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 MRPL42Q9Y6G3 142 aaKnown RBP14.04□□□□□ -0.16
PTPN13-203ENST00000427191 PHYHO14832 338 aa14.04□□□□□ -0.16
PTPN13-203ENST00000427191 TPST2O60704 377 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms