RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 NPAS2Q99743 824 aa13.81□□□□□ -0.2
PDAP1-202ENST00000426447 EBNA1BP2Q99848 306 aaKnown RBP13.81□□□□□ -0.2
PDAP1-202ENST00000426447 KCNJ16Q9NPI9 418 aa13.81□□□□□ -0.2
PDAP1-202ENST00000426447 CHRAC1Q9NRG0 131 aa13.81□□□□□ -0.2
PDAP1-202ENST00000426447 FAM114A2Q9NRY5 505 aa13.81□□□□□ -0.2
PDAP1-202ENST00000426447 HCN3Q9P1Z3 774 aa13.81□□□□□ -0.2
PDAP1-202ENST00000426447 MTORP42345 2549 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 NKX2-6A6NCS4 301 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 FAM90A27PA6NNH2 459 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 USP27XA6NNY8 438 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 HAT1O14929 419 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 SLC25A12O75746 678 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 MATN4O95460 622 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 NSA2O95478 260 aaKnown RBP13.8□□□□□ -0.2
PDAP1-202ENST00000426447 CHRM3P20309 590 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 RPS3P23396 243 aaKnown RBP eCLIP13.8□□□□□ -0.2
PDAP1-202ENST00000426447 FMO4P31512 558 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 DNAJA1P31689 397 aaKnown RBP13.8□□□□□ -0.2
PDAP1-202ENST00000426447 IST1P53990 364 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 PPP2R2AP63151 447 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 ABATP80404 500 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 RELAQ04206 551 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 ARHGAP19Q14CB8 494 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 NSDHLQ15738 373 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 SFT2D3Q587I9 215 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 MEI1Q5TIA1 1274 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 RPS19BP1Q86WX3 136 aaKnown RBP13.8□□□□□ -0.2
PDAP1-202ENST00000426447 PPFIBP2Q8ND30 876 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 FAM57AQ8TBR7 257 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 PEX13Q92968 403 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 TMEM125Q96AQ2 219 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 FAM136AQ96C01 138 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 CALR3Q96L12 384 aaKnown RBP13.8□□□□□ -0.2
PDAP1-202ENST00000426447 PKP4Q99569 1192 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 OLFM1Q99784 485 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 UCK2Q9BZX2 261 aa13.8□□□□□ -0.2
PDAP1-202ENST00000426447 A0A1B0GTH9 108 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 ARHGEF33A8MVX0 844 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 H7BY64 318 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 SGK494L7N484 410 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 SMAPO00193 183 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 TFECO14948 347 aaPredicted RBP13.79□□□□□ -0.2
PDAP1-202ENST00000426447 CDC40O60508 579 aaKnown RBP eCLIP13.79□□□□□ -0.2
PDAP1-202ENST00000426447 ZWINTO95229 277 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 SYF2O95926 243 aaKnown RBP13.79□□□□□ -0.2
PDAP1-202ENST00000426447 IFNB1P01574 187 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 CATP04040 527 aaKnown RBP13.79□□□□□ -0.2
PDAP1-202ENST00000426447 ERGP11308 486 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 IL1RNP18510 177 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 CHRNB4P30926 498 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 STIP1P31948 543 aaKnown RBP13.79□□□□□ -0.2
PDAP1-202ENST00000426447 PTGER1P34995 402 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 FDFT1P37268 417 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 BCL6P41182 706 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 CYB561P49447 251 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 MYBPHQ13203 477 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 ABRAXAS2Q15018 415 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.79□□□□□ -0.2
PDAP1-202ENST00000426447 PCID2Q5JVF3 399 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 RNFT1Q5M7Z0 435 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 PRSS41Q7RTY9 318 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 FGD2Q7Z6J4 655 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 SDCCAG8Q86SQ7 713 aaPredicted RBP13.79□□□□□ -0.2
PDAP1-202ENST00000426447 CD163Q86VB7 1156 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 CHERPQ8IWX8 916 aaKnown RBP13.79□□□□□ -0.2
PDAP1-202ENST00000426447 MPP5Q8N3R9 675 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 LILRB4Q8NHJ6 448 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 NRGNQ92686 78 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 RND1Q92730 232 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 PRAP1Q96NZ9 151 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 ANKHQ9HCJ1 492 aa13.79□□□□□ -0.2
PDAP1-202ENST00000426447 FAM221AA4D161 298 aa13.78□□□□□ -0.2
PDAP1-202ENST00000426447 MYO1CO00159 1063 aa13.78□□□□□ -0.2
PDAP1-202ENST00000426447 PFDN6O15212 129 aa13.78□□□□□ -0.2
PDAP1-202ENST00000426447 NME2P1O60361 137 aa13.78□□□□□ -0.2
PDAP1-202ENST00000426447 PRMT3O60678 531 aa13.78□□□□□ -0.2
PDAP1-202ENST00000426447 NIPSNAP2O75323 286 aa13.78□□□□□ -0.2
PDAP1-202ENST00000426447 IGFBP2P18065 325 aa13.78□□□□□ -0.2
PDAP1-202ENST00000426447 NME2P22392 152 aa13.78□□□□□ -0.2
PDAP1-202ENST00000426447 CYLC1P35663 651 aaPredicted RBP13.78□□□□□ -0.2
PDAP1-202ENST00000426447 OR4D2P58180 307 aa13.78□□□□□ -0.2
PDAP1-202ENST00000426447 SNRPNP63162 240 aaKnown RBP13.78□□□□□ -0.2
PDAP1-202ENST00000426447 KLHL38Q2WGJ6 581 aa13.78□□□□□ -0.2
PDAP1-202ENST00000426447 CTSL3PQ5NE16 218 aa13.78□□□□□ -0.2
PDAP1-202ENST00000426447 ZNF468Q5VIY5 522 aaPredicted RBP13.78□□□□□ -0.2
PDAP1-202ENST00000426447 TGIF2LYQ8IUE0 185 aa13.78□□□□□ -0.2
PDAP1-202ENST00000426447 DMRTC2Q8IXT2 367 aaPredicted RBP13.78□□□□□ -0.2
PDAP1-202ENST00000426447 CCDC170Q8IYT3 715 aa13.78□□□□□ -0.2
PDAP1-202ENST00000426447 SHISA5Q8N114 240 aa13.78□□□□□ -0.2
PDAP1-202ENST00000426447 LGI4Q8N135 537 aa13.78□□□□□ -0.2
PDAP1-202ENST00000426447 UBL4BQ8N7F7 174 aa13.78□□□□□ -0.2
PDAP1-202ENST00000426447 POGLUT1Q8NBL1 392 aa13.78□□□□□ -0.2
PDAP1-202ENST00000426447 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.78□□□□□ -0.2
PDAP1-202ENST00000426447 SLC35B2Q8TB61 432 aa13.78□□□□□ -0.2
PDAP1-202ENST00000426447 MACROD1Q9BQ69 325 aa13.78□□□□□ -0.2
PDAP1-202ENST00000426447 SLC24A3Q9HC58 644 aa13.78□□□□□ -0.2
PDAP1-202ENST00000426447 NPDC1Q9NQX5 325 aaPredicted RBP13.78□□□□□ -0.2
PDAP1-202ENST00000426447 RAB6BQ9NRW1 208 aa13.78□□□□□ -0.2
PDAP1-202ENST00000426447 KCNN3Q9UGI6 736 aa13.78□□□□□ -0.2
PDAP1-202ENST00000426447 RNF6Q9Y252 685 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms