RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 MAT1AQ00266 395 aaKnown RBP12.96□□□□□ -0.33
SNX3-204ENST00000426155 RAPSNQ13702 412 aa12.96□□□□□ -0.33
SNX3-204ENST00000426155 TGFBIQ15582 683 aa12.96□□□□□ -0.33
SNX3-204ENST00000426155 GLE1Q53GS7 698 aaKnown RBP12.96□□□□□ -0.33
SNX3-204ENST00000426155 VWA2Q5GFL6 755 aa12.96□□□□□ -0.33
SNX3-204ENST00000426155 RAPH1Q70E73 1250 aa12.96□□□□□ -0.33
SNX3-204ENST00000426155 PRICKLE2Q7Z3G6 844 aa12.96□□□□□ -0.33
SNX3-204ENST00000426155 THOC6Q86W42 341 aaKnown RBP12.96□□□□□ -0.33
SNX3-204ENST00000426155 RAB43Q86YS6 212 aa12.96□□□□□ -0.33
SNX3-204ENST00000426155 APLFQ8IW19 511 aaPredicted RBP12.96□□□□□ -0.33
SNX3-204ENST00000426155 CEP112Q8N8E3 955 aa12.96□□□□□ -0.33
SNX3-204ENST00000426155 AMER3Q8N944 861 aa12.96□□□□□ -0.33
SNX3-204ENST00000426155 ATL1Q8WXF7 558 aa12.96□□□□□ -0.33
SNX3-204ENST00000426155 ANKRD7Q92527 254 aa12.96□□□□□ -0.33
SNX3-204ENST00000426155 RHBDF1Q96CC6 855 aa12.96□□□□□ -0.33
SNX3-204ENST00000426155 MOCOSQ96EN8 888 aa12.96□□□□□ -0.33
SNX3-204ENST00000426155 MMABQ96EY8 250 aaPredicted RBP12.96□□□□□ -0.33
SNX3-204ENST00000426155 UBXN10Q96LJ8 280 aa12.96□□□□□ -0.33
SNX3-204ENST00000426155 FAM117AQ9C073 453 aa12.96□□□□□ -0.33
SNX3-204ENST00000426155 ACSS2Q9NR19 701 aa12.96□□□□□ -0.33
SNX3-204ENST00000426155 TUBD1Q9UJT1 453 aa12.96□□□□□ -0.33
SNX3-204ENST00000426155 SLC22A14Q9Y267 594 aa12.96□□□□□ -0.33
SNX3-204ENST00000426155 UQCRHLA0A096LP55 91 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 A6NL46 340 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 MKRN2OSH3BPM6 223 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 TAPBPO15533 448 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 WDR47O94967 919 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 UQCRHP07919 91 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 RHOXF2BP0C7M4 288 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 SFTPCP11686 197 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 PLA2G2AP14555 144 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 IL1RNP18510 177 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 VARSP26640 1264 aaKnown RBP12.95□□□□□ -0.34
SNX3-204ENST00000426155 SLC6A12P48065 614 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 CDKL1Q00532 357 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 RELAQ04206 551 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 NAB1Q13506 487 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 SSPNQ14714 243 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 LACTB2Q53H82 288 aaPredicted RBP12.95□□□□□ -0.34
SNX3-204ENST00000426155 MROH9Q5TGP6 573 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 PRMT9Q6P2P2 845 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 TMPRSS11BQ86T26 416 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 ZNF605Q86T29 641 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 GSPT2Q8IYD1 628 aaKnown RBP12.95□□□□□ -0.34
SNX3-204ENST00000426155 KCT2Q8NC54 265 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 ABHD11Q8NFV4 315 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 OR9A4Q8NGU2 314 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 STT3BQ8TCJ2 826 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 SLC5A11Q8WWX8 675 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 ESAMQ96AP7 390 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 RHOXF2Q9BQY4 288 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 HAUS8Q9BT25 410 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 TRIM4Q9C037 500 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 SLC26A1Q9H2B4 701 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 ACSS3Q9H6R3 686 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 WDR54Q9H977 334 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 IGSF5Q9NSI5 407 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 P4HTMQ9NXG6 502 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 NFU1Q9UMS0 254 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 ASB1Q9Y576 335 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 HELZ2Q9BYK8 2649 aaKnown RBP12.95□□□□□ -0.34
SNX3-204ENST00000426155 BAHCC1Q9P281 2608 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 TENM4Q6N022 2769 aa12.95□□□□□ -0.34
SNX3-204ENST00000426155 VSTM2BA6NLU5 285 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 SOCS6O14544 535 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 OR1F1O43749 312 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 SLC28A2O43868 658 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 B3GALT4O96024 378 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 ALBP02768 609 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 PIM1P11309 404 aaPredicted RBP12.94□□□□□ -0.34
SNX3-204ENST00000426155 TFEBP19484 476 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 HRH2P25021 359 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 PHBP35232 272 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 KCNC1P48547 511 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 CCR8P51685 355 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 EFNA3P52797 238 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 KLC1Q07866 573 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 DSG2Q14126 1118 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 GARNL3Q5VVW2 1013 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 ASPGQ86U10 573 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 LAPTM4BQ86VI4 370 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 PDSS2Q86YH6 399 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 RELL1Q8IUW5 271 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 CENPLQ8N0S6 344 aaPredicted RBP12.94□□□□□ -0.34
SNX3-204ENST00000426155 MFSD9Q8NBP5 474 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 FDCSPQ8NFU4 85 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 OR4K1Q8NGD4 311 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 KCTD4Q8WVF5 259 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 TM4SF19Q96DZ7 209 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 CYTH2Q99418 400 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 NUDT9Q9BW91 350 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 YIPF2Q9BWQ6 316 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 FAM129AQ9BZQ8 928 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 DRC3Q9H069 523 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 ALG9Q9H6U8 611 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 SNX15Q9NRS6 342 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 WWOXQ9NZC7 414 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 TRPC4Q9UBN4 977 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 ZNF282Q9UDV7 671 aaPredicted RBP12.94□□□□□ -0.34
SNX3-204ENST00000426155 RNF112Q9ULX5 631 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms