RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 FKBP9O95302 570 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 IGFBP5P24593 272 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 PTPN6P29350 595 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 PREPP48147 710 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 GZMMP51124 257 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 FCHO2Q0JRZ9 810 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 ABHD18Q0P651 414 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 NFATC3Q12968 1075 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 CLPPQ16740 277 aaPredicted RBP10.31□□□□□ -0.76
CUX1-205ENST00000425244 GAB4Q2WGN9 574 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 GDPD4Q6W3E5 623 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 FKBP9P1Q75LS8 142 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 VTCN1Q7Z7D3 282 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 CLECL1Q8IZS7 167 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 CPA6Q8N4T0 437 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 SMRP1Q8NCR6 262 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 PJA1Q8NG27 643 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 MRGPRX3Q96LB0 322 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 RDH12Q96NR8 316 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 DOK1Q99704 481 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 MYOCQ99972 504 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 TUBA1CQ9BQE3 449 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 FAM83DQ9H4H8 585 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 AASDHPPTQ9NRN7 309 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 USE1Q9NZ43 259 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 SCN8AQ9UQD0 1980 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 MAN2B2Q9Y2E5 1009 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 IGLV3-16A0A075B6K0 115 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 E7EQ34 232 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 CLIC1O00299 241 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 PBLDP30039 288 aaPredicted RBP10.31□□□□□ -0.76
CUX1-205ENST00000425244 HOXD12P35452 270 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 PLA2G16P53816 162 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 RAD23AP54725 363 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 SEC13P55735 322 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 PDGFRLQ15198 375 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 LRIT3Q3SXY7 679 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 GGTA1PQ4G0N0 100 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 ADNP2Q6IQ32 1131 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 HIPK1Q86Z02 1210 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 DCP2Q8IU60 420 aaKnown RBP10.31□□□□□ -0.76
CUX1-205ENST00000425244 FAM9CQ8IZT9 166 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 LILRA3Q8N6C8 439 aaPredicted RBP10.31□□□□□ -0.76
CUX1-205ENST00000425244 ZNF557Q8N988 423 aaPredicted RBP10.31□□□□□ -0.76
CUX1-205ENST00000425244 L3MBTL4Q8NA19 623 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 TBC1D15Q8TC07 691 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 TESCQ96BS2 214 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 MSLNLQ96KJ4 702 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 C19orf43Q9BQ61 176 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 RIOK2Q9BVS4 552 aaKnown RBP10.31□□□□□ -0.76
CUX1-205ENST00000425244 MAGIXQ9H6Y5 334 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 BAG5Q9UL15 447 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 VPS4AQ9UN37 437 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 KPNA3O00505 521 aaPredicted RBP10.3□□□□□ -0.76
CUX1-205ENST00000425244 SEC14L2O76054 403 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 EPN2O95208 641 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 BCL10O95999 233 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 HTR1AP08908 422 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 JUPP14923 745 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 CD22P20273 847 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 AQP1P29972 269 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 BDKRB1P46663 353 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 TRPC1P48995 793 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 PSMD7P51665 324 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 METAP1P53582 386 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 PFN3P60673 137 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 NAE1Q13564 534 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 DUOXA1Q1HG43 343 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 CDKL4Q5MAI5 379 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 CEP68Q76N32 757 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 PLPP6Q8IY26 295 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 GPR156Q8NFN8 814 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 DNAJB8Q8NHS0 232 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 FNDC8Q8TC99 324 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 CSGALNACT1Q8TDX6 532 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 ZNF641Q96N77 438 aaPredicted RBP10.3□□□□□ -0.76
CUX1-205ENST00000425244 TRPV4Q9HBA0 871 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 KLHL42Q9P2K6 505 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 TMEFF2Q9UIK5 374 aaPredicted RBP10.3□□□□□ -0.76
CUX1-205ENST00000425244 FBXO10Q9UK96 956 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 SAMD4AQ9UPU9 718 aaKnown RBP10.3□□□□□ -0.76
CUX1-205ENST00000425244 TMED5Q9Y3A6 229 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 DGKBQ9Y6T7 804 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 LAMA1P25391 3075 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 ARHGEF33A8MVX0 844 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.3□□□□□ -0.76
CUX1-205ENST00000425244 SLC1A7O00341 560 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 PLK4O00444 970 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 TSPAN6O43657 245 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 CCNDBP1O95273 360 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 ZBTB11O95625 1053 aaPredicted RBP10.3□□□□□ -0.76
CUX1-205ENST00000425244 MPC1LP0DKB6 136 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 PRPS1L1P21108 318 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 XPAP23025 273 aaPredicted RBP10.3□□□□□ -0.76
CUX1-205ENST00000425244 GSTM2P28161 218 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 FMO3P31513 532 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 OPRD1P41143 372 aa10.3□□□□□ -0.76
CUX1-205ENST00000425244 POLR2LP62875 67 aaKnown RBP10.3□□□□□ -0.76
CUX1-205ENST00000425244 MLLT1Q03111 559 aaPredicted RBP10.3□□□□□ -0.76
CUX1-205ENST00000425244 ACSM2AQ08AH3 577 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms