RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.42□□□□□ -0.74
USP49-204ENST00000423567 SLC13A3Q8WWT9 602 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 NACC2Q96BF6 587 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 MIEF2Q96C03 454 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 MMABQ96EY8 250 aaPredicted RBP10.42□□□□□ -0.74
USP49-204ENST00000423567 ABHD17AQ96GS6 310 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 C10orf90Q96M02 699 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 FER1L6-AS2Q96M78 137 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 TSNARE1Q96NA8 513 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 AIF1LQ9BQI0 150 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 RHOXF2Q9BQY4 288 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 CAPS2Q9BXY5 557 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 ING2Q9H160 280 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 PELI2Q9HAT8 420 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 SLC22A11Q9NSA0 550 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 CD274Q9NZQ7 290 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 RNF112Q9ULX5 631 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 NFU1Q9UMS0 254 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 SH2B3Q9UQQ2 575 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 SLC22A14Q9Y267 594 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 ACOT9Q9Y305 439 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 A0A087WUV0 522 aaPredicted RBP10.41□□□□□ -0.74
USP49-204ENST00000423567 TRBC2A0A5B9 178 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 FEZF1A0PJY2 475 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 P2RX6O15547 441 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 OR1F1O43749 312 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 KLHL41O60662 606 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 CNOT3O75175 753 aaKnown RBP10.41□□□□□ -0.74
USP49-204ENST00000423567 H2AFYO75367 372 aaKnown RBP10.41□□□□□ -0.74
USP49-204ENST00000423567 KRT38O76015 456 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 WISP3O95389 354 aaPredicted RBP10.41□□□□□ -0.74
USP49-204ENST00000423567 SERPIND1P05546 499 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 LTA4HP09960 611 aaKnown RBP10.41□□□□□ -0.74
USP49-204ENST00000423567 SLC35E2BP0CK96 405 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 GNAZP19086 355 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 CXCR2P25025 360 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 TYK2P29597 1187 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 ECHS1P30084 290 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 BCL6P41182 706 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 MSH2P43246 934 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 SERPINB8P50452 374 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 SERPINB9P50453 376 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 CCL11P51671 97 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 SKP1P63208 163 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 RGS1Q08116 209 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 BMPR2Q13873 1038 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 RBBP7Q16576 425 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 NKG7Q16617 165 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 FAM83EQ2M2I3 478 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 CDKL4Q5MAI5 379 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 SULT1C3Q6IMI6 304 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 KLC3Q6P597 504 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 COX15Q7KZN9 410 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 VN1R4Q7Z5H5 301 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 TMPRSS11BQ86T26 416 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 CLEC1AQ8NC01 280 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 EXT2Q93063 718 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 NEIL2Q969S2 332 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 KIAA1191Q96A73 305 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 RHBDF1Q96CC6 855 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 UBXN10Q96LJ8 280 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 OR4K3Q96R72 315 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 SLC25A23Q9BV35 468 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 FUT8Q9BYC5 575 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 SOX17Q9H6I2 414 aaPredicted RBP10.41□□□□□ -0.74
USP49-204ENST00000423567 MKKSQ9NPJ1 570 aaPredicted RBP10.41□□□□□ -0.74
USP49-204ENST00000423567 ZNF71Q9NQZ8 489 aaPredicted RBP10.41□□□□□ -0.74
USP49-204ENST00000423567 SEMA3GQ9NS98 782 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 C14orf105Q9NVL8 296 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 TRPC4Q9UBN4 977 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 CTSFQ9UBX1 484 aa10.41□□□□□ -0.74
USP49-204ENST00000423567 SPTBP11277 2137 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 A0A0A6YYC8 382 aaPredicted RBP10.4□□□□□ -0.74
USP49-204ENST00000423567 CCDC189A1A4V9 331 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 URADA6NGE7 173 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 SYCE1LA8MT33 242 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 SUPT3HB4E1H0 165 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 POC1B-GALNT4F8VUJ3 575 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 I3L1I5 382 aaPredicted RBP10.4□□□□□ -0.74
USP49-204ENST00000423567 CLGNO14967 610 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 NDUFS4O43181 175 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 SUPT3HO75486 399 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 STK16O75716 305 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 DNAJB5O75953 348 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 MED26O95402 600 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 STATHP02808 62 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 UMODP07911 640 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 ZGLP1P0C6A0 271 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 TFEBP19484 476 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 MMP11P24347 488 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 SLC6A12P48065 614 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 PGDP52209 483 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 MEF2AQ02078 507 aaPredicted RBP10.4□□□□□ -0.74
USP49-204ENST00000423567 CDC16Q13042 620 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 CHAF1BQ13112 559 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 RBBP5Q15291 538 aaKnown RBP10.4□□□□□ -0.74
USP49-204ENST00000423567 OR4D1Q15615 310 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 ZXDCQ2QGD7 858 aaPredicted RBP10.4□□□□□ -0.74
USP49-204ENST00000423567 CATSPEREQ5SY80 951 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 LGSNQ5TDP6 509 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms