RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 CCDC54Q8NEL0 328 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 PRRG4Q9BZD6 226 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 FAIMQ9NVQ4 179 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 ERVK13-1Q9NX77 482 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 PADI2Q9Y2J8 665 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 CLCA1A8K7I4 914 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 LOC730098B7Z3J9 87 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 LRRN3E7EW58 273 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 H3BSH0 61 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 GNRH1P01148 92 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 KLK1P06870 262 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 ADH1AP07327 375 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 MMP3P08254 477 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 TCEA1P23193 301 aaKnown RBP12.01□□□□□ -0.49
CLCN4-203ENST00000421085 MPIP34949 423 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 RASGEF1BQ0VAM2 473 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 SLBPQ14493 270 aaKnown RBP eCLIP12.01□□□□□ -0.49
CLCN4-203ENST00000421085 LRRC73Q5JTD7 316 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 SLC25A25Q6KCM7 469 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 MBOAT1Q6ZNC8 495 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 PMEPA1Q969W9 287 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 CDKN2AIPNLQ96HQ2 116 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 GAL3ST4Q96RP7 486 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 DPCDQ9BVM2 203 aaPredicted RBP12.01□□□□□ -0.49
CLCN4-203ENST00000421085 LRRN3Q9H3W5 708 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 NANSQ9NR45 359 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 SACM1LQ9NTJ5 587 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 MANSC4A6NHS7 340 aaPredicted RBP12.01□□□□□ -0.49
CLCN4-203ENST00000421085 PI15O43692 258 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 VIPP01282 170 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 HOXA10P31260 410 aaPredicted RBP12.01□□□□□ -0.49
CLCN4-203ENST00000421085 MAP2K3P46734 347 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 E2F1Q01094 437 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 PON2Q15165 354 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 SPIN4Q56A73 249 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 MAP1SQ66K74 1059 aaPredicted RBP12.01□□□□□ -0.49
CLCN4-203ENST00000421085 TIGD4Q8IY51 512 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 LRCH3Q96II8 777 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 MAELQ96JY0 434 aaKnown RBP12.01□□□□□ -0.49
CLCN4-203ENST00000421085 PCBD2Q9H0N5 130 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 CCM2LQ9NUG4 571 aaPredicted RBP12.01□□□□□ -0.49
CLCN4-203ENST00000421085 GNG8Q9UK08 70 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 ZNF878C9JN71 531 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 MANBAO00462 879 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 TOXO94900 526 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 KAT7O95251 611 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 ZNF14P17017 642 aaPredicted RBP12.01□□□□□ -0.49
CLCN4-203ENST00000421085 ATP4BP51164 291 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 SEC23BQ15437 767 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 GPR68Q15743 365 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 CYBRD1Q53TN4 286 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 NANOGP8Q6NSW7 305 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 HSDL2Q6YN16 418 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 ZNF227Q86WZ6 799 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 GALNT13Q8IUC8 556 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 SLC22A15Q8IZD6 547 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 SLC15A4Q8N697 577 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 TSSK6Q9BXA6 273 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 NANOGQ9H9S0 305 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 TPT1P8Q9HAU6 139 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 SLC22A14Q9Y267 594 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 DISC1C4P0D8 188 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 PLATP00750 562 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 ANXA3P12429 323 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 CKMT1AP12532 417 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 KELP23276 732 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 DNAJB1P25685 340 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 CLCN7P51798 805 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 ZNF678Q5SXM1 525 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 CEACAM20Q6UY09 585 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 SLC36A4Q6YBV0 504 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 Q8N402 240 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 KCT2Q8NC54 265 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 RPL10LQ96L21 214 aaKnown RBP12.01□□□□□ -0.49
CLCN4-203ENST00000421085 HSPA12BQ96MM6 686 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 HAPLN3Q96S86 360 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 TSNAXQ99598 290 aaKnown RBP12.01□□□□□ -0.49
CLCN4-203ENST00000421085 TP63Q9H3D4 680 aaPredicted RBP12.01□□□□□ -0.49
CLCN4-203ENST00000421085 SAV1Q9H4B6 383 aaPredicted RBP12.01□□□□□ -0.49
CLCN4-203ENST00000421085 PSAT1Q9Y617 370 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 SOCS2O14508 198 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 PPM1BO75688 479 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 F8A1P23610 371 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 CLCN2P51788 898 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 CCL23P55773 120 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 GXYLT1Q4G148 440 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 TREML2Q5T2D2 321 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 LIPKQ5VXJ0 399 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 LRRC66Q68CR7 880 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 ALG1LQ6GMV1 187 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 PLEKHG7Q6ZR37 379 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 RELL1Q8IUW5 271 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 LINC00471Q8N535 108 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 OR8S1Q8NH09 359 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 HCN3Q9P1Z3 774 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 HCN4Q9Y3Q4 1203 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 FUOMA2VDF0 154 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 B3GALT2O43825 422 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 IL12BP29460 328 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 PIK3CBP42338 1070 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms