RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 C5orf60A6NFR6 353 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 I3L1I5 382 aaPredicted RBP8.39□□□□□ -1.07
TRIM39-206ENST00000420746 CASKO14936 926 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 HCN1O60741 890 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 FTH1P02794 183 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 MYBL1P10243 752 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 GZMAP12544 262 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 ACRV1P26436 265 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 TIMP3P35625 211 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 AVPR1BP47901 424 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 MAN2A2P49641 1150 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 MAT1AQ00266 395 aaKnown RBP8.39□□□□□ -1.07
TRIM39-206ENST00000420746 PLGLB1Q02325 96 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 ACTN3Q08043 901 aaPredicted RBP8.39□□□□□ -1.07
TRIM39-206ENST00000420746 GRB7Q14451 532 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 PTPRCAPQ14761 206 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 ETFDHQ16134 617 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 NDUFA9Q16795 377 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 MFSD4BQ5TF39 518 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 FBXO42Q6P3S6 717 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 SUSD1Q6UWL2 747 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 TAX1BP1Q86VP1 789 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 MAP7D3Q8IWC1 876 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 GPALPP1Q8IXQ4 340 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 FAM109AQ8N4B1 249 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 SLC25A41Q8N5S1 370 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 NAXEQ8NCW5 288 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 PLPP5Q8NEB5 264 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 TRIM11Q96F44 468 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 MRGPRX2Q96LB1 330 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 TEKT5Q96M29 485 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 TTTY12Q9BZ98 90 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 UBP1Q9NZI7 540 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 LPAR3Q9UBY5 353 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 ARL5AQ9Y689 179 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 ABCA1O95477 2261 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 A0A0U1RQJ8 604 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 FEZF1A0PJY2 475 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 FAM166BA8MTA8 275 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 MAGEB17A8MXT2 336 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 PPP1R12AO14974 1030 aaPredicted RBP8.38□□□□□ -1.07
TRIM39-206ENST00000420746 NSA2O95478 260 aaKnown RBP8.38□□□□□ -1.07
TRIM39-206ENST00000420746 TPH1P17752 444 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 CDK11BP21127 795 aaKnown RBP8.38□□□□□ -1.07
TRIM39-206ENST00000420746 IL10P22301 178 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 SOX18P35713 384 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 KLK7P49862 253 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 RELAQ04206 551 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 PDK1Q15118 436 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 HKDC1Q2TB90 917 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 SYTL3Q4VX76 610 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 WIPI1Q5MNZ9 446 aaPredicted RBP8.38□□□□□ -1.07
TRIM39-206ENST00000420746 KCTD11Q693B1 232 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 GK5Q6ZS86 529 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 OTOAQ7RTW8 1153 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 MDGA2Q7Z553 956 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 LACC1Q8IV20 430 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 LIX1Q8N485 282 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 KIF2BQ8N4N8 673 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 C2orf73Q8N5S3 287 aaPredicted RBP8.38□□□□□ -1.07
TRIM39-206ENST00000420746 TMEM156Q8N614 296 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 CLDN19Q8N6F1 224 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 MLKLQ8NB16 471 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 PSD4Q8NDX1 1056 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 OR2M7Q8NG81 312 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 OR2A1Q8NGT9 310 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 ELMO1Q92556 727 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 ZMYND19Q96E35 227 aaPredicted RBP8.38□□□□□ -1.07
TRIM39-206ENST00000420746 OLFM3Q96PB7 478 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 SGPP1Q9BX95 441 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 RBSNQ9H1K0 784 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 DEPPQ9NTK1 212 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 SLC39A10Q9ULF5 831 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 PCDHA3Q9Y5H8 950 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 LIPGQ9Y5X9 500 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 NFS1Q9Y697 457 aa8.38□□□□□ -1.07
TRIM39-206ENST00000420746 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.37□□□□□ -1.079e-7■■■■■ 39.9
TRIM39-206ENST00000420746 NOTCH1P46531 2555 aa8.37□□□□□ -1.07
TRIM39-206ENST00000420746 TMCO5BA8MYB1 307 aa8.37□□□□□ -1.07
TRIM39-206ENST00000420746 RNF223E7ERA6 249 aa8.37□□□□□ -1.07
TRIM39-206ENST00000420746 NRP2O60462 931 aa8.37□□□□□ -1.07
TRIM39-206ENST00000420746 EPPINO95925 133 aa8.37□□□□□ -1.07
TRIM39-206ENST00000420746 IL18BPO95998 194 aa8.37□□□□□ -1.07
TRIM39-206ENST00000420746 IL2RAP01589 272 aa8.37□□□□□ -1.07
TRIM39-206ENST00000420746 FTLP02792 175 aaPredicted RBP8.37□□□□□ -1.07
TRIM39-206ENST00000420746 PKMP14618 531 aaKnown RBP8.37□□□□□ -1.07
TRIM39-206ENST00000420746 FERP16591 822 aa8.37□□□□□ -1.07
TRIM39-206ENST00000420746 EEF1GP26641 437 aaKnown RBP8.37□□□□□ -1.07
TRIM39-206ENST00000420746 OPRM1P35372 400 aa8.37□□□□□ -1.07
TRIM39-206ENST00000420746 XCR1P46094 333 aa8.37□□□□□ -1.07
TRIM39-206ENST00000420746 ZNF136P52737 540 aa8.37□□□□□ -1.07
TRIM39-206ENST00000420746 MEF2AQ02078 507 aaPredicted RBP8.37□□□□□ -1.07
TRIM39-206ENST00000420746 RHAGQ02094 409 aa8.37□□□□□ -1.07
TRIM39-206ENST00000420746 MPP3Q13368 585 aa8.37□□□□□ -1.07
TRIM39-206ENST00000420746 ABRAXAS2Q15018 415 aa8.37□□□□□ -1.07
TRIM39-206ENST00000420746 NSDHLQ15738 373 aa8.37□□□□□ -1.07
TRIM39-206ENST00000420746 HADHQ16836 314 aaKnown RBP8.37□□□□□ -1.07
TRIM39-206ENST00000420746 CCDC38Q502W7 563 aa8.37□□□□□ -1.07
TRIM39-206ENST00000420746 TCP11X2Q5H9J9 407 aa8.37□□□□□ -1.07
TRIM39-206ENST00000420746 UBAP2Q5T6F2 1119 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms