RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 PRAP1Q96NZ9 151 aa20.13■□□□□ 0.81
GPC1-202ENST00000420138 TWSG1Q9GZX9 223 aa20.13■□□□□ 0.81
GPC1-202ENST00000420138 RHBGQ9H310 441 aa20.13■□□□□ 0.81
GPC1-202ENST00000420138 INVSQ9Y283 1065 aa20.13■□□□□ 0.81
GPC1-202ENST00000420138 LRP4O75096 1905 aa20.13■□□□□ 0.81
GPC1-202ENST00000420138 BCAS2O75934 225 aaPredicted RBP20.13■□□□□ 0.81
GPC1-202ENST00000420138 CCR8P51685 355 aa20.13■□□□□ 0.81
GPC1-202ENST00000420138 CSNK1G2P78368 415 aa20.13■□□□□ 0.81
GPC1-202ENST00000420138 FLOT2Q14254 428 aa20.13■□□□□ 0.81
GPC1-202ENST00000420138 TRIM25Q14258 630 aaKnown RBP20.13■□□□□ 0.81
GPC1-202ENST00000420138 SPIN4Q56A73 249 aa20.13■□□□□ 0.81
GPC1-202ENST00000420138 RABL3Q5HYI8 236 aa20.13■□□□□ 0.81
GPC1-202ENST00000420138 CWF19L1Q69YN2 538 aaKnown RBP20.13■□□□□ 0.81
GPC1-202ENST00000420138 FAM9CQ8IZT9 166 aa20.13■□□□□ 0.81
GPC1-202ENST00000420138 KRT78Q8N1N4 520 aa20.13■□□□□ 0.81
GPC1-202ENST00000420138 DEFB119Q8N690 84 aa20.13■□□□□ 0.81
GPC1-202ENST00000420138 DNAJB14Q8TBM8 379 aa20.13■□□□□ 0.81
GPC1-202ENST00000420138 EDAQ92838 391 aa20.13■□□□□ 0.81
GPC1-202ENST00000420138 ASB9Q96DX5 294 aa20.13■□□□□ 0.81
GPC1-202ENST00000420138 ZNF184Q99676 751 aaPredicted RBP20.13■□□□□ 0.81
GPC1-202ENST00000420138 PCDHAC1Q9H158 963 aa20.13■□□□□ 0.81
GPC1-202ENST00000420138 OR51B5Q9H339 312 aa20.13■□□□□ 0.81
GPC1-202ENST00000420138 SPHK1Q9NYA1 384 aa20.13■□□□□ 0.81
GPC1-202ENST00000420138 PCDHB11Q9Y5F2 797 aa20.13■□□□□ 0.81
GPC1-202ENST00000420138 NDUFS2O75306 463 aa20.12■□□□□ 0.81
GPC1-202ENST00000420138 KLHL18O94889 574 aa20.12■□□□□ 0.81
GPC1-202ENST00000420138 CELA2BP08218 269 aaPredicted RBP20.12■□□□□ 0.81
GPC1-202ENST00000420138 NDUFS1P28331 727 aa20.12■□□□□ 0.81
GPC1-202ENST00000420138 CLNS1AP54105 237 aaKnown RBP20.12■□□□□ 0.81
GPC1-202ENST00000420138 C21orf58P58505 322 aa20.12■□□□□ 0.81
GPC1-202ENST00000420138 C6orf10Q5SRN2 563 aa20.12■□□□□ 0.81
GPC1-202ENST00000420138 NT5DC2Q9H857 520 aa20.12■□□□□ 0.81
GPC1-202ENST00000420138 TRBV23OR9-2A0A075B6M9 112 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 LRATO95237 230 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 WNT1P04628 370 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 CD27P26842 260 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 ILF3Q12906 894 aaKnown RBP eCLIP20.11■□□□□ 0.81
GPC1-202ENST00000420138 NANOGP8Q6NSW7 305 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 IYDQ6PHW0 289 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 RNF111Q6ZNA4 994 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 SYT12Q8IV01 421 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 FAM20CQ8IXL6 584 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 PHACTR4Q8IZ21 702 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 GPR156Q8NFN8 814 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 AIF1LQ9BQI0 150 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 NANOGQ9H9S0 305 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 BATF3Q9NR55 127 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 LRCH1Q9Y2L9 728 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 A0A1W2PR77 199 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 FEZF1A0PJY2 475 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 H3BNX3 289 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 K7ESF4 209 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 PRPS1L1P21108 318 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 TIA1P31483 386 aaKnown RBP eCLIP20.11■□□□□ 0.81
GPC1-202ENST00000420138 PWP1Q13610 501 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 RBBP5Q15291 538 aaKnown RBP20.11■□□□□ 0.81
GPC1-202ENST00000420138 UGT8Q16880 541 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 KBTBD2Q8IY47 623 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 FBXL6Q8N531 539 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 CADM4Q8NFZ8 388 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.11■□□□□ 0.81
GPC1-202ENST00000420138 GFM2Q969S9 779 aaKnown RBP20.11■□□□□ 0.81
GPC1-202ENST00000420138 KLHDC7BQ96G42 594 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 SLC6A20Q9NP91 592 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 SERHLQ9NQF3 203 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 DLGAP2Q9P1A6 1054 aa20.11■□□□□ 0.81
GPC1-202ENST00000420138 SAP18O00422 153 aaKnown RBP20.1■□□□□ 0.81
GPC1-202ENST00000420138 LCMT2O60294 686 aaKnown RBP20.1■□□□□ 0.81
GPC1-202ENST00000420138 PRMT3O60678 531 aa20.1■□□□□ 0.81
GPC1-202ENST00000420138 B3GALT4O96024 378 aa20.1■□□□□ 0.81
GPC1-202ENST00000420138 HSD17B1P14061 328 aa20.1■□□□□ 0.81
GPC1-202ENST00000420138 CXCR2P25025 360 aa20.1■□□□□ 0.81
GPC1-202ENST00000420138 MAPKAPK3Q16644 382 aa20.1■□□□□ 0.81
GPC1-202ENST00000420138 ZFP1Q6P2D0 407 aa20.1■□□□□ 0.81
GPC1-202ENST00000420138 COMMD6Q7Z4G1 85 aa20.1■□□□□ 0.81
GPC1-202ENST00000420138 AMIGO1Q86WK6 493 aa20.1■□□□□ 0.81
GPC1-202ENST00000420138 SFTPA2Q8IWL1 248 aa20.1■□□□□ 0.81
GPC1-202ENST00000420138 MSRB3Q8IXL7 192 aa20.1■□□□□ 0.81
GPC1-202ENST00000420138 METTL4Q8N3J2 472 aa20.1■□□□□ 0.81
GPC1-202ENST00000420138 OR2L3Q8NG85 312 aa20.1■□□□□ 0.81
GPC1-202ENST00000420138 OR4E2Q8NGC2 313 aa20.1■□□□□ 0.81
GPC1-202ENST00000420138 WDR48Q8TAF3 677 aa20.1■□□□□ 0.81
GPC1-202ENST00000420138 FAM174AQ8TBP5 190 aa20.1■□□□□ 0.81
GPC1-202ENST00000420138 PATE1Q8WXA2 126 aa20.1■□□□□ 0.81
GPC1-202ENST00000420138 SPACA7Q96KW9 195 aa20.1■□□□□ 0.81
GPC1-202ENST00000420138 OR52E6Q96RD3 313 aa20.1■□□□□ 0.81
GPC1-202ENST00000420138 CGREF1Q99674 301 aa20.1■□□□□ 0.81
GPC1-202ENST00000420138 PITHD1Q9GZP4 211 aaPredicted RBP20.1■□□□□ 0.81
GPC1-202ENST00000420138 PCED1AQ9H1Q7 454 aa20.1■□□□□ 0.81
GPC1-202ENST00000420138 VCX3BQ9H321 246 aa20.1■□□□□ 0.81
GPC1-202ENST00000420138 AASDHPPTQ9NRN7 309 aa20.1■□□□□ 0.81
GPC1-202ENST00000420138 OR6C2Q9NZP2 312 aa20.1■□□□□ 0.81
GPC1-202ENST00000420138 TAAR2Q9P1P5 351 aa20.1■□□□□ 0.81
GPC1-202ENST00000420138 EXO1Q9UQ84 846 aaKnown RBP20.1■□□□□ 0.81
GPC1-202ENST00000420138 AXIN1O15169 862 aa20.09■□□□□ 0.81
GPC1-202ENST00000420138 ANXA4P09525 319 aaPredicted RBP20.09■□□□□ 0.81
GPC1-202ENST00000420138 PTX3P26022 381 aaPredicted RBP20.09■□□□□ 0.81
GPC1-202ENST00000420138 SHMT2P34897 504 aa20.09■□□□□ 0.81
GPC1-202ENST00000420138 ATXN3P54252 364 aaPredicted RBP20.09■□□□□ 0.81
GPC1-202ENST00000420138 PLIN5Q00G26 463 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms