RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 BTRCQ9Y297 605 aa13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 AP1M2Q9Y6Q5 423 aa13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 A0A0J9YY10 115 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 ATP6AP2A0A1C7CYW4 349 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 ISM1B1AKI9 464 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 E9PBE3 544 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 H7BY64 318 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 FFAR3O14843 346 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 KHNYNO15037 678 aaKnown RBP13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 GPR42O15529 346 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 KLHL41O60662 606 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 SDC3O75056 442 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 ATP6AP2O75787 350 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 TSFMP43897 325 aaKnown RBP13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 C21orf58P58505 322 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 RPS15AP62244 130 aaKnown RBP13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 SLC14A1Q13336 389 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 HERC3Q15034 1050 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 ZIC1Q15915 447 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 AP5B1Q2VPB7 878 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 ADPRMQ3LIE5 342 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 PDCD4Q53EL6 469 aaKnown RBP13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 SPIN4Q56A73 249 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 KIAA1614Q5VZ46 1190 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 C2orf73Q8N5S3 287 aaPredicted RBP13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 ANKRD53Q8N9V6 530 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 KYQ8NBH2 561 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 TRPV3Q8NET8 790 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 BAHD1Q8TBE0 780 aaPredicted RBP13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 CHTF18Q8WVB6 975 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 PRAP1Q96NZ9 151 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 SERPINI1Q99574 410 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 DPH7Q9BTV6 452 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 SEMA6CQ9H3T2 930 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 LRTM1Q9HBL6 345 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 C1GALT1Q9NS00 363 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 AIG1Q9NVV5 245 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 LRIT1Q9P2V4 623 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 WBP11Q9Y2W2 641 aaKnown RBP13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 GPR45Q9Y5Y3 372 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 PTGDR2Q9Y5Y4 395 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 RNF215Q9Y6U7 377 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 ANKRD12Q6UB98 2062 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 GON4LQ3T8J9 2241 aa13.67□□□□□ -0.22
SHMT1P1-201ENST00000419974 ARHGEF17Q96PE2 2063 aaPredicted RBP13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 EME2A4GXA9 379 aaPredicted RBP13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 RHPN2P1A8MT19 583 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 MAGEB17A8MXT2 336 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 TM4SF5O14894 197 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 TOX3O15405 576 aaPredicted RBP13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 GDF9O60383 454 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 PROS1P07225 676 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 ALDOCP09972 364 aaKnown RBP13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 AMD1P17707 334 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 POLR2CP19387 275 aaPredicted RBP13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 MAPK1P28482 360 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 TBL3Q12788 808 aaKnown RBP13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 PWP1Q13610 501 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 TSTA3Q13630 321 aaPredicted RBP13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 SUZ12Q15022 739 aaKnown RBP13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 NR6A1Q15406 480 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 SF3A2Q15428 464 aaKnown RBP13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 NR0B2Q15466 257 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 TCEA2Q15560 299 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 IMPG1Q17R60 797 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 AASDHQ4L235 1098 aaPredicted RBP13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 RFTN2Q52LD8 501 aaPredicted RBP13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 TMEM35AQ53FP2 167 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 FOXR1Q6PIV2 292 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 WDR74Q6RFH5 385 aaPredicted RBP13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 VN1R5Q7Z5H4 357 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 MFSD9Q8NBP5 474 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 CREB3L4Q8TEY5 395 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 RSC1A1Q92681 617 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 NAT6Q93015 286 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 CMTM5Q96DZ9 223 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 DPYSL5Q9BPU6 564 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 TBC1D10AQ9BXI6 508 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 ABCG4Q9H172 646 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 SPNS1Q9H2V7 528 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 ZIM2Q9NZV7 527 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 PADI4Q9UM07 663 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 PCDHGA4Q9Y5G9 962 aa13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 COPG1Q9Y678 874 aaKnown RBP13.66□□□□□ -0.22
SHMT1P1-201ENST00000419974 IGHV1OR21-1A0A087WYE8 117 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 LY6G6EA0A0G2JKS1 128 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 DYTNA2CJ06 578 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 ANKDD1BA6NHY2 528 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 PATE3B3GLJ2 98 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 TRIM38O00635 465 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 PEX11AO75192 247 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 TBX6O95947 436 aaPredicted RBP13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 C9P02748 559 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 MSL3P1P0C860 447 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 PRPS2P11908 318 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 ENGP17813 658 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 NCF2P19878 526 aaPredicted RBP13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 GPX3P22352 226 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 CALB2P22676 271 aa13.65□□□□□ -0.22
SHMT1P1-201ENST00000419974 GSTM5P46439 218 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms