RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 NAV2Q8IVL1 2488 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 LOC102723996A0A087X1L8 192 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 WIPF3A6NGB9 483 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 H0YIG0 161 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 BANF1O75531 89 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 WFS1O76024 890 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 BMP10O95393 424 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 NSA2O95478 260 aaKnown RBP8.94□□□□□ -0.98
NUP50-205ENST00000419387 STATHP02808 62 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 SERPINA7P05543 415 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 HIST1H2AGP0C0S8 130 aaPredicted RBP8.94□□□□□ -0.98
NUP50-205ENST00000419387 ICAM2P13598 275 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 HIST1H2ADP20671 130 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 CCND1P24385 295 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 SOX11P35716 441 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 CDKN2DP55273 166 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 TBPL1P62380 186 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 SNRPNP63162 240 aaKnown RBP8.94□□□□□ -0.98
NUP50-205ENST00000419387 CSNK1G2P78368 415 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 MAT1AQ00266 395 aaKnown RBP8.94□□□□□ -0.98
NUP50-205ENST00000419387 EEF1A2Q05639 463 aaKnown RBP8.94□□□□□ -0.98
NUP50-205ENST00000419387 CDC16Q13042 620 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 SP140Q13342 867 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 NAE1Q13564 534 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 BBS9Q3SYG4 887 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 RBM20Q5T481 1227 aaKnown RBP8.94□□□□□ -0.98
NUP50-205ENST00000419387 TEDDM1Q5T9Z0 273 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 HIST2H2BCQ6DN03 193 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 RPUSD3Q6P087 351 aaKnown RBP8.94□□□□□ -0.98
NUP50-205ENST00000419387 AGTRAPQ6RW13 159 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 LCTLQ6UWM7 567 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 RIPOR1Q6ZS17 1223 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 ZNF572Q7Z3I7 529 aaPredicted RBP8.94□□□□□ -0.98
NUP50-205ENST00000419387 VN1R4Q7Z5H5 301 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 GALNT7Q86SF2 657 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 C17orf64Q86WR6 236 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 IGDCC3Q8IVU1 814 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 ZC3H7AQ8IWR0 971 aaKnown RBP8.94□□□□□ -0.98
NUP50-205ENST00000419387 CAMKVQ8NCB2 501 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 CATSPER1Q8NEC5 780 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 OR1N1Q8NGS0 311 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 OR9A4Q8NGU2 314 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 BRIX1Q8TDN6 353 aaKnown RBP8.94□□□□□ -0.98
NUP50-205ENST00000419387 GRHL3Q8TE85 626 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 FAR1Q8WVX9 515 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 HAS2Q92819 552 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 TM4SF19Q96DZ7 209 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 CERS2Q96G23 380 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 HIST1H2AHQ96KK5 128 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 CAPZA3Q96KX2 299 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 C16orf45Q96MC5 204 aaPredicted RBP8.94□□□□□ -0.98
NUP50-205ENST00000419387 HIST1H2AJQ99878 128 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 H2AFJQ9BTM1 129 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 ZNF700Q9H0M5 742 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 ATG10Q9H0Y0 220 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 PPANQ9NQ55 473 aaKnown RBP8.94□□□□□ -0.98
NUP50-205ENST00000419387 RIC8BQ9NVN3 520 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 PTGFRNQ9P2B2 879 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 ERRFI1Q9UJM3 462 aaPredicted RBP8.94□□□□□ -0.98
NUP50-205ENST00000419387 MKL2Q9ULH7 1088 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 SLC5A6Q9Y289 635 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 MRPS2Q9Y399 296 aaKnown RBP8.94□□□□□ -0.98
NUP50-205ENST00000419387 MAST4O15021 2626 aa8.94□□□□□ -0.98
NUP50-205ENST00000419387 MDC1Q14676 2089 aaKnown RBP8.93□□□□□ -0.98
NUP50-205ENST00000419387 ICE1Q9Y2F5 2266 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 FEZF1A0PJY2 475 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 DYTNA2CJ06 578 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 LCMT2O60294 686 aaKnown RBP8.93□□□□□ -0.98
NUP50-205ENST00000419387 LDLRP01130 860 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 NPPBP16860 134 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 CASQ1P31415 396 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 GRK3P35626 688 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 BCL6P41182 706 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 IL2P60568 153 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 AP2B1P63010 937 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 ARG2P78540 354 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 MORF4L2Q15014 288 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 PCOLCEQ15113 449 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 PHKG1Q16816 387 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 CAPN13Q6MZZ7 669 aaPredicted RBP8.93□□□□□ -0.98
NUP50-205ENST00000419387 TMEM214Q6NUQ4 689 aaKnown RBP8.93□□□□□ -0.98
NUP50-205ENST00000419387 MBOAT1Q6ZNC8 495 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 SYDE1Q6ZW31 735 aaPredicted RBP8.93□□□□□ -0.98
NUP50-205ENST00000419387 ASPGQ86U10 573 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 SLC26A11Q86WA9 606 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 PDIK1LQ8N165 341 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 SIRT6Q8N6T7 355 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 OR51Q1Q8NH59 317 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 SLC13A3Q8WWT9 602 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 METTL21AQ8WXB1 218 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 ALKBH8Q96BT7 664 aaKnown RBP8.93□□□□□ -0.98
NUP50-205ENST00000419387 LINGO1Q96FE5 620 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 IMMP1LQ96LU5 166 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 C5orf34Q96MH7 638 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 RUNDC3BQ96NL0 473 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 CYTH2Q99418 400 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 MACROD1Q9BQ69 325 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 HAUS8Q9BT25 410 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 TUBB6Q9BUF5 446 aa8.93□□□□□ -0.98
NUP50-205ENST00000419387 SGPP1Q9BX95 441 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms