RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 FFAR3O14843 346 aa19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 GPR42O15529 346 aa19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 PRAMEF4O60810 478 aa19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 ZGLP1P0C6A0 271 aa19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 CCDC166P0CW27 439 aa19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 STMN1P16949 149 aa19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 SPRP35270 261 aaPredicted RBP19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 GGT5P36269 586 aa19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 SOX8P57073 446 aa19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 REEP5Q00765 189 aa19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 KLC1Q07866 573 aa19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 SYT16Q17RD7 645 aa19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 GLE1Q53GS7 698 aaKnown RBP19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 PRAMEF9Q5VWM5 478 aa19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 KIRREL2Q6UWL6 708 aa19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 THOC6Q86W42 341 aaKnown RBP19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 PDSS2Q86YH6 399 aa19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 SLC5A11Q8WWX8 675 aa19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 RERGQ96A58 199 aaPredicted RBP19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 MOCOSQ96EN8 888 aa19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 IP6K3Q96PC2 410 aa19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 TGIF2Q9GZN2 237 aa19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 CDC42EP4Q9H3Q1 356 aaKnown RBP19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 ACSS2Q9NR19 701 aa19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 IGSF5Q9NSI5 407 aa19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 NXT1Q9UKK6 140 aaKnown RBP19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 SLC22A14Q9Y267 594 aa19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 A0A1W2PQ72 361 aa19.57■□□□□ 0.72
PKNOX1-202ENST00000418336 AGPSO00116 658 aa19.57■□□□□ 0.72
PKNOX1-202ENST00000418336 TXNDC9O14530 226 aa19.57■□□□□ 0.72
PKNOX1-202ENST00000418336 GDF5P43026 501 aa19.57■□□□□ 0.72
PKNOX1-202ENST00000418336 COLEC12Q5KU26 742 aa19.57■□□□□ 0.72
PKNOX1-202ENST00000418336 AFAP1L2Q8N4X5 818 aa19.57■□□□□ 0.72
PKNOX1-202ENST00000418336 ANKRD53Q8N9V6 530 aa19.57■□□□□ 0.72
PKNOX1-202ENST00000418336 KCT2Q8NC54 265 aa19.57■□□□□ 0.72
PKNOX1-202ENST00000418336 LRRN4CLQ8ND94 238 aa19.57■□□□□ 0.72
PKNOX1-202ENST00000418336 KIAA1191Q96A73 305 aa19.57■□□□□ 0.72
PKNOX1-202ENST00000418336 COL26A1Q96A83 441 aa19.57■□□□□ 0.72
PKNOX1-202ENST00000418336 TSPAN17Q96FV3 270 aa19.57■□□□□ 0.72
PKNOX1-202ENST00000418336 SMAD5Q99717 465 aaKnown RBP19.57■□□□□ 0.72
PKNOX1-202ENST00000418336 AICDAQ9GZX7 198 aa19.57■□□□□ 0.72
PKNOX1-202ENST00000418336 DRC3Q9H069 523 aa19.57■□□□□ 0.72
PKNOX1-202ENST00000418336 ACSS3Q9H6R3 686 aa19.57■□□□□ 0.72
PKNOX1-202ENST00000418336 ZNF282Q9UDV7 671 aaPredicted RBP19.57■□□□□ 0.72
PKNOX1-202ENST00000418336 ASB1Q9Y576 335 aa19.57■□□□□ 0.72
PKNOX1-202ENST00000418336 TRBC2A0A5B9 178 aa19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 PYCARD-AS1I3L0S3 204 aa19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 SLC28A2O43868 658 aa19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 NSA2O95478 260 aaKnown RBP19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 ANXA5P08758 320 aa19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 FBLP22087 321 aaKnown RBP19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 SCTRP47872 440 aa19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 HNMTP50135 292 aa19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 CCR8P51685 355 aa19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 MAT1AQ00266 395 aaKnown RBP19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 Q0VFX4 171 aa19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 HYAL2Q12891 473 aa19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 ATG9BQ674R7 924 aa19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 ASB18Q6ZVZ8 466 aa19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 ASPGQ86U10 573 aa19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 ISCA2Q86U28 154 aa19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 ZC3H7AQ8IWR0 971 aaKnown RBP19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 CENPLQ8N0S6 344 aaPredicted RBP19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 PDPRQ8NCN5 879 aa19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 MNS1Q8NEH6 495 aa19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 OR9A4Q8NGU2 314 aa19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 KIF18AQ8NI77 898 aa19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 TSNARE1Q96NA8 513 aa19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 SLC25A23Q9BV35 468 aa19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 EPN3Q9H201 632 aa19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 PELI2Q9HAT8 420 aa19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 TXNDC16Q9P2K2 825 aa19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 FBXL4Q9UKA2 621 aa19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 DOCK10Q96BY6 2186 aa19.56■□□□□ 0.72
PKNOX1-202ENST00000418336 ALOX12BO75342 701 aa19.55■□□□□ 0.72
PKNOX1-202ENST00000418336 EPORP19235 508 aa19.55■□□□□ 0.72
PKNOX1-202ENST00000418336 CASRP41180 1078 aa19.55■□□□□ 0.72
PKNOX1-202ENST00000418336 SLC12A2P55011 1212 aa19.55■□□□□ 0.72
PKNOX1-202ENST00000418336 ATP6V0D1P61421 351 aa19.55■□□□□ 0.72
PKNOX1-202ENST00000418336 BMPR2Q13873 1038 aa19.55■□□□□ 0.72
PKNOX1-202ENST00000418336 CSHL1Q14406 222 aa19.55■□□□□ 0.72
PKNOX1-202ENST00000418336 FBXO48Q5FWF7 155 aa19.55■□□□□ 0.72
PKNOX1-202ENST00000418336 CDKL4Q5MAI5 379 aa19.55■□□□□ 0.72
PKNOX1-202ENST00000418336 NXPE4Q6UWF7 544 aa19.55■□□□□ 0.72
PKNOX1-202ENST00000418336 SLCO4C1Q6ZQN7 724 aa19.55■□□□□ 0.72
PKNOX1-202ENST00000418336 OR11G2Q8NGC1 345 aa19.55■□□□□ 0.72
PKNOX1-202ENST00000418336 SLC13A3Q8WWT9 602 aa19.55■□□□□ 0.72
PKNOX1-202ENST00000418336 MIEF2Q96C03 454 aa19.55■□□□□ 0.72
PKNOX1-202ENST00000418336 MMABQ96EY8 250 aaPredicted RBP19.55■□□□□ 0.72
PKNOX1-202ENST00000418336 ATOH8Q96SQ7 321 aa19.55■□□□□ 0.72
PKNOX1-202ENST00000418336 ZNF552Q9H707 407 aaPredicted RBP19.55■□□□□ 0.72
PKNOX1-202ENST00000418336 SEMA3GQ9NS98 782 aa19.55■□□□□ 0.72
PKNOX1-202ENST00000418336 COPG2Q9UBF2 871 aa19.55■□□□□ 0.72
PKNOX1-202ENST00000418336 ANAPC2Q9UJX6 822 aa19.55■□□□□ 0.72
PKNOX1-202ENST00000418336 PTBP2Q9UKA9 531 aaKnown RBP19.55■□□□□ 0.72
PKNOX1-202ENST00000418336 CDC14AQ9UNH5 594 aa19.55■□□□□ 0.72
PKNOX1-202ENST00000418336 MAP4K5Q9Y4K4 846 aa19.55■□□□□ 0.72
PKNOX1-202ENST00000418336 UBR5O95071 2799 aaPredicted RBP19.54■□□□□ 0.72
PKNOX1-202ENST00000418336 C4orf51C9J302 202 aa19.54■□□□□ 0.72
PKNOX1-202ENST00000418336 H0YIG0 161 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms