RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 ADGRD2Q7Z7M1 963 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 TMEM150AQ86TG1 271 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 SETD3Q86TU7 594 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 RBM23Q86U06 439 aaKnown RBP3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 TDRPQ86YL5 185 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 BBS7Q8IWZ6 715 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 DDIASQ8IXT1 998 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 CMTM8Q8IZV2 173 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 CNPY4Q8N129 248 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 SLC25A41Q8N5S1 370 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 ANKRD42Q8N9B4 389 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 DCAF4L2Q8NA75 395 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 SPATA22Q8NHS9 363 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 MGARPQ8TDB4 240 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 GDPD5Q8WTR4 605 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 ING5Q8WYH8 240 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 NPIPB3Q92617 1050 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 TLCD1Q96CP7 247 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 MSI2Q96DH6 328 aaKnown RBP3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 TMA16Q96EY4 203 aaKnown RBP3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 CERS2Q96G23 380 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 FAR2Q96K12 515 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZNF599Q96NL3 588 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 CAMK1GQ96NX5 476 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 SLC22A12Q96S37 553 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 SEMA3CQ99985 751 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 APOL2Q9BQE5 337 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 MLPHQ9BV36 600 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 IL22Q9GZX6 179 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 IQCGQ9H095 443 aaKnown RBP3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 NSRP1Q9H0G5 558 aaKnown RBP3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 RBM38Q9H0Z9 239 aaKnown RBP3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 SLC25A51Q9H1U9 297 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 TRABDQ9H4I3 376 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 SLC28A3Q9HAS3 691 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 KCNK9Q9NPC2 374 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 FSCN3Q9NQT6 498 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 INTS9Q9NV88 658 aaKnown RBP3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 NSMCE4AQ9NXX6 385 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 FETUBQ9UGM5 382 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 LGALS13Q9UHV8 139 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 SLC25A13Q9UJS0 675 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 ARHGAP26Q9UNA1 814 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 RPS6KL1Q9Y6S9 549 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 HTTP42858 3142 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 SCN8AQ9UQD0 1980 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 A0A0D9SEW6 157 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 A0A0G2JK05 382 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 FAM237BA0A1B0GVD1 139 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 TMEM120BA0PK00 339 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 HEATR9A2RTY3 570 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 OR2W5A6NFC9 320 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 FAM159BA6NKW6 160 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 NEDD8-MDP1E9PL57 170 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 SLC9A3R1O14745 358 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 CACNG3O60359 315 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 SPAG7O75391 227 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 TCEA3O75764 348 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 TMCC1O94876 653 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 IGSF6O95976 241 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 SLC4A1P02730 911 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 MT-ND3P03897 115 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 FGF1P05230 155 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 ITGA5P08648 1049 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 SNRPAP09012 282 aaKnown RBP3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 FGF2P09038 288 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 NEFHP12036 1026 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 PEPDP12955 493 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 CHN1P15882 459 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 CEBPBP17676 345 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 HLA-DPA1P20036 260 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 PRKCHP24723 683 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 CNTFP26441 200 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 GP5P40197 560 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 MDH1P40925 334 aaKnown RBP3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 NRIP1P48552 1158 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 SERPINH1P50454 418 aaKnown RBP3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 RHOAP61586 193 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 PRAMEP78395 509 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 NTHL1P78549 312 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 ARF5P84085 180 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 PPARDQ03181 441 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 SLC10A7Q0GE19 358 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 OLIG2Q13516 323 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 THOC5Q13769 683 aaKnown RBP3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 GALNT3Q14435 633 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 POU6F1Q14863 301 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 RASA2Q15283 850 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 SMAD1Q15797 465 aaKnown RBP3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 DUSP6Q16828 381 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 ODF3L2Q3SX64 289 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZNF585BQ52M93 769 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 PIK3CD-AS1Q5SR53 167 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 RARS2Q5T160 578 aaKnown RBP3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 HHATQ5VTY9 493 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 STEAP4Q687X5 459 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 KCTD11Q693B1 232 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 PDPK2PQ6A1A2 396 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 TTC19Q6DKK2 380 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 FAM109BQ6ICB4 259 aaPredicted RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms