RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 LINC01555Q8NAE3 123 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 ADCY4Q8NFM4 1077 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 TTLQ8NG68 377 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 NUDT8Q8WV74 236 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 NELL1Q92832 810 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 PDXPQ96GD0 296 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 CCDC115Q96NT0 180 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 ACAT2Q9BWD1 397 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 PRDM8Q9NQV8 689 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 EGFL7Q9UHF1 273 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 MCM8Q9UJA3 840 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 COLQQ9Y215 455 aaPredicted RBP16.14■□□□□ 0.17
SSBP3-205ENST00000417664 PLEKHM1Q9Y4G2 1056 aa16.14■□□□□ 0.17
SSBP3-205ENST00000417664 GNG14A0A1W2PPG7 69 aa16.13■□□□□ 0.17
SSBP3-205ENST00000417664 RFXANKO14593 260 aa16.13■□□□□ 0.17
SSBP3-205ENST00000417664 GMNNO75496 209 aa16.13■□□□□ 0.17
SSBP3-205ENST00000417664 CCNDBP1O95273 360 aa16.13■□□□□ 0.17
SSBP3-205ENST00000417664 TGFB1P01137 390 aa16.13■□□□□ 0.17
SSBP3-205ENST00000417664 IL10P22301 178 aa16.13■□□□□ 0.17
SSBP3-205ENST00000417664 PSMA4P25789 261 aaKnown RBP16.13■□□□□ 0.17
SSBP3-205ENST00000417664 SRP54P61011 504 aaKnown RBP16.13■□□□□ 0.17
SSBP3-205ENST00000417664 CYP4F3Q08477 520 aa16.13■□□□□ 0.17
SSBP3-205ENST00000417664 DUOXA1Q1HG43 343 aa16.13■□□□□ 0.17
SSBP3-205ENST00000417664 ADNP2Q6IQ32 1131 aa16.13■□□□□ 0.17
SSBP3-205ENST00000417664 PTCRAQ6ISU1 281 aaPredicted RBP16.13■□□□□ 0.17
SSBP3-205ENST00000417664 Q6ZS52 159 aa16.13■□□□□ 0.17
SSBP3-205ENST00000417664 COMMD6Q7Z4G1 85 aa16.13■□□□□ 0.17
SSBP3-205ENST00000417664 R3HCC1LQ7Z5L2 792 aaKnown RBP16.13■□□□□ 0.17
SSBP3-205ENST00000417664 IFNEQ86WN2 208 aa16.13■□□□□ 0.17
SSBP3-205ENST00000417664 C2orf73Q8N5S3 287 aaPredicted RBP16.13■□□□□ 0.17
SSBP3-205ENST00000417664 LMNTD1Q8N9Z9 388 aa16.13■□□□□ 0.17
SSBP3-205ENST00000417664 OR52E1Q8NGJ3 308 aa16.13■□□□□ 0.17
SSBP3-205ENST00000417664 THUMPD3Q9BV44 507 aaKnown RBP16.13■□□□□ 0.17
SSBP3-205ENST00000417664 SPNS1Q9H2V7 528 aa16.13■□□□□ 0.17
SSBP3-205ENST00000417664 LRCH1Q9Y2L9 728 aa16.13■□□□□ 0.17
SSBP3-205ENST00000417664 PCDHB14Q9Y5E9 798 aa16.13■□□□□ 0.17
SSBP3-205ENST00000417664 DGKBQ9Y6T7 804 aa16.13■□□□□ 0.17
SSBP3-205ENST00000417664 SPTBN5Q9NRC6 3674 aaKnown RBP16.13■□□□□ 0.17
SSBP3-205ENST00000417664 DHRS12A0PJE2 317 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 OR52A4PA6NMU1 304 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 H0Y8X5 98 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 HNRNPRO43390 633 aaKnown RBP16.12■□□□□ 0.17
SSBP3-205ENST00000417664 LRATO95237 230 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 HOXB9P17482 250 aaPredicted RBP16.12■□□□□ 0.17
SSBP3-205ENST00000417664 SHMT2P34897 504 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 MTPNP58546 118 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 RBBP5Q15291 538 aaKnown RBP16.12■□□□□ 0.17
SSBP3-205ENST00000417664 CPTPQ5TA50 214 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 IZUMO2Q6UXV1 221 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 IKBIPQ70UQ0 350 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 ARMCX6Q7L4S7 300 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 SPPL2CQ8IUH8 684 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 MSRB3Q8IXL7 192 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 ZNF740Q8NDX6 193 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 OR52E4Q8NGH9 312 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 OR2A1Q8NGT9 310 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.12■□□□□ 0.177e-6■■■■□ 22
SSBP3-205ENST00000417664 COQ8BQ96D53 544 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 MTERF3Q96E29 417 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 SHDQ96IW2 340 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 ZNF583Q96ND8 569 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 CENPKQ9BS16 269 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 REXO4Q9GZR2 422 aaKnown RBP16.12■□□□□ 0.17
SSBP3-205ENST00000417664 COPS7BQ9H9Q2 264 aaPredicted RBP16.12■□□□□ 0.17
SSBP3-205ENST00000417664 LMAN1LQ9HAT1 526 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 MYNNQ9NPC7 610 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 ATAD3AQ9NVI7 634 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 WSB2Q9NYS7 404 aaPredicted RBP16.12■□□□□ 0.17
SSBP3-205ENST00000417664 SLC25A37Q9NYZ2 338 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 OR6C2Q9NZP2 312 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 TBC1D29Q9UFV1 150 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 ATP6V1HQ9UI12 483 aa16.12■□□□□ 0.17
SSBP3-205ENST00000417664 AKAP10O43572 662 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 SCN2BO60939 215 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 IGHV4-34P06331 123 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 PEX2P28328 305 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 CD6P30203 668 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 GSTM5P46439 218 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 MEF2AQ02078 507 aaPredicted RBP16.11■□□□□ 0.17
SSBP3-205ENST00000417664 DEPDC1Q5TB30 811 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 OR4F3Q6IEY1 312 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 Q6ZSR6 202 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 PAGE2Q7Z2X7 111 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 FLCNQ8NFG4 579 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 GPR156Q8NFN8 814 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 TSTD1Q8NFU3 115 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 OR2T12Q8NG77 320 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 OR7A2PQ8NGA2 310 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 CANT1Q8WVQ1 401 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 ZFPM2Q8WW38 1151 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 SLCO4A1Q96BD0 722 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 TOE1Q96GM8 510 aaKnown RBP16.11■□□□□ 0.17
SSBP3-205ENST00000417664 ZNF570Q96NI8 536 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 QRFPRQ96P65 431 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 NELL2Q99435 816 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 DUSP26Q9BV47 211 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 TRIM8Q9BZR9 551 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 VCXQ9H320 206 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 OR51B5Q9H339 312 aa16.11■□□□□ 0.17
SSBP3-205ENST00000417664 KAT8Q9H7Z6 458 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms