RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 LURAP1Q96LR2 239 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 LMF1Q96S06 567 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 PLAC1Q9HBJ0 212 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 MOCS1Q9NZB8 636 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 NINJ2Q9NZG7 142 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 NXT1Q9UKK6 140 aaKnown RBP12.26□□□□□ -0.45
LINC00339-202ENST00000416769 ITGB1BP2Q9UKP3 347 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 SLC39A10Q9ULF5 831 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 MRPS2Q9Y399 296 aaKnown RBP12.26□□□□□ -0.45
LINC00339-202ENST00000416769 SCN2AQ99250 2005 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 IGHV1-45A0A0A0MS14 117 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 NSG1A0A0A6YYJ2 146 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 A0A1B0GUH1 482 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 CCDC151A5D8V7 595 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 OR2W5A6NFC9 320 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 IDSB3KWA1 339 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 H0YGG7 62 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 QSOX1O00391 747 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 CCL21O00585 134 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 P2RX6O15547 441 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 ERLIN1O75477 346 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 SLCO2B1O94956 709 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 C1orf105O95561 183 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 PIM1P11309 404 aaPredicted RBP12.25□□□□□ -0.45
LINC00339-202ENST00000416769 FBLP22087 321 aaKnown RBP12.25□□□□□ -0.45
LINC00339-202ENST00000416769 ARNTP27540 789 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 HTR1EP28566 365 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 PHBP35232 272 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 ARF3P61204 181 aaPredicted RBP12.25□□□□□ -0.45
LINC00339-202ENST00000416769 ADORA2A-AS1P86434 159 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 PCOLCEQ15113 449 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 PRTGQ2VWP7 1150 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 ZC3H12BQ5HYM0 836 aaKnown RBP12.25□□□□□ -0.45
LINC00339-202ENST00000416769 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.25□□□□□ -0.45
LINC00339-202ENST00000416769 FCRLBQ6BAA4 426 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 RPUSD3Q6P087 351 aaKnown RBP12.25□□□□□ -0.45
LINC00339-202ENST00000416769 FBXO42Q6P3S6 717 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 UNC5DQ6UXZ4 953 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 RNF44Q7L0R7 432 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 MRGPRGQ86SM5 289 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 KBTBD2Q8IY47 623 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 ZNF295-AS1Q8N0V1 137 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 GABPB2Q8TAK5 448 aaPredicted RBP12.25□□□□□ -0.45
LINC00339-202ENST00000416769 CALML6Q8TD86 181 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 MOCOSQ96EN8 888 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 FUT8Q9BYC5 575 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 HES7Q9BYE0 225 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 TRIM8Q9BZR9 551 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 TSPAN10Q9H1Z9 355 aaPredicted RBP12.25□□□□□ -0.45
LINC00339-202ENST00000416769 ENAMQ9NRM1 1142 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 GALPQ9UBC7 116 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 TRPC4Q9UBN4 977 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 ZNF282Q9UDV7 671 aaPredicted RBP12.25□□□□□ -0.45
LINC00339-202ENST00000416769 SCN3AQ9NY46 2000 aa12.25□□□□□ -0.45
LINC00339-202ENST00000416769 TACC2O95359 2948 aa12.24□□□□□ -0.45
LINC00339-202ENST00000416769 IGLV3-12A0A075B6K2 115 aa12.24□□□□□ -0.45
LINC00339-202ENST00000416769 IGKV1-8A0A0C4DH67 115 aa12.24□□□□□ -0.45
LINC00339-202ENST00000416769 CD3EAPO15446 510 aaKnown RBP12.24□□□□□ -0.45
LINC00339-202ENST00000416769 MAN1A2O60476 641 aa12.24□□□□□ -0.45
LINC00339-202ENST00000416769 PPARGP37231 505 aaPredicted RBP12.24□□□□□ -0.45
LINC00339-202ENST00000416769 PLOD1Q02809 727 aaPredicted RBP12.24□□□□□ -0.45
LINC00339-202ENST00000416769 OCA2Q04671 838 aa12.24□□□□□ -0.45
LINC00339-202ENST00000416769 ART3Q13508 389 aa12.24□□□□□ -0.45
LINC00339-202ENST00000416769 THOC5Q13769 683 aaKnown RBP12.24□□□□□ -0.45
LINC00339-202ENST00000416769 C3AR1Q16581 482 aa12.24□□□□□ -0.45
LINC00339-202ENST00000416769 FASTKD1Q53R41 847 aaKnown RBP12.24□□□□□ -0.45
LINC00339-202ENST00000416769 TCTE1Q5JU00 501 aa12.24□□□□□ -0.45
LINC00339-202ENST00000416769 CTSL3PQ5NE16 218 aa12.24□□□□□ -0.45
LINC00339-202ENST00000416769 YOD1Q5VVQ6 348 aaPredicted RBP12.24□□□□□ -0.45
LINC00339-202ENST00000416769 NEPROQ6NW34 567 aa12.24□□□□□ -0.45
LINC00339-202ENST00000416769 SUSD1Q6UWL2 747 aa12.24□□□□□ -0.45
LINC00339-202ENST00000416769 NDUFAF7Q7L592 441 aa12.24□□□□□ -0.45
LINC00339-202ENST00000416769 PLD3Q8IV08 490 aa12.24□□□□□ -0.45
LINC00339-202ENST00000416769 ZC3H7AQ8IWR0 971 aaKnown RBP12.24□□□□□ -0.45
LINC00339-202ENST00000416769 SKA2Q8WVK7 121 aaPredicted RBP12.24□□□□□ -0.45
LINC00339-202ENST00000416769 CERS2Q96G23 380 aa12.24□□□□□ -0.45
LINC00339-202ENST00000416769 DPH7Q9BTV6 452 aa12.24□□□□□ -0.45
LINC00339-202ENST00000416769 YIPF2Q9BWQ6 316 aa12.24□□□□□ -0.45
LINC00339-202ENST00000416769 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.24□□□□□ -0.45
LINC00339-202ENST00000416769 P2RY12Q9H244 342 aa12.24□□□□□ -0.45
LINC00339-202ENST00000416769 C20orf96Q9NUD7 363 aaPredicted RBP12.24□□□□□ -0.45
LINC00339-202ENST00000416769 INTS7Q9NVH2 962 aaKnown RBP12.24□□□□□ -0.45
LINC00339-202ENST00000416769 TINAGQ9UJW2 476 aa12.24□□□□□ -0.45
LINC00339-202ENST00000416769 RUVBL1Q9Y265 456 aaKnown RBP12.24□□□□□ -0.45
LINC00339-202ENST00000416769 TRAV17A0A0B4J275 112 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 TCRBV9S1A1TA0A576 114 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 DYTNA2CJ06 578 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 OR2A25A4D2G3 310 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 RIPK2O43353 540 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 FOXS1O43638 330 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 SERPINA7P05543 415 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 APOA4P06727 396 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 ABHD2P08910 425 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 ERVK-10P10266 1014 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 STX2P32856 288 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 CA7P43166 264 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 EMP2P54851 167 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 MGAT5Q09328 741 aa12.23□□□□□ -0.45
LINC00339-202ENST00000416769 ZXDCQ2QGD7 858 aaPredicted RBP12.23□□□□□ -0.45
LINC00339-202ENST00000416769 FAM214AQ32MH5 1076 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms