RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 RNF165Q6ZSG1 346 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 USP53Q70EK8 1073 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 PIGWQ7Z7B1 504 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 PAQR7Q86WK9 346 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.06□□□□□ -1.12
RBM39-208ENST00000416108 LAS2Q8IYD9 372 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 C19orf47Q8N9M1 422 aaKnown RBP8.06□□□□□ -1.12
RBM39-208ENST00000416108 MFSD9Q8NBP5 474 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 TRPV3Q8NET8 790 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 OR7G3Q8NG95 312 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 OR4K1Q8NGD4 311 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 CEP70Q8NHQ1 597 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 FLVCR1-AS1Q8TAF5 88 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 BAHD1Q8TBE0 780 aaPredicted RBP8.06□□□□□ -1.12
RBM39-208ENST00000416108 WDR20Q8TBZ3 569 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 C10orf82Q8WW14 230 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 STON2Q8WXE9 905 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 USP7Q93009 1102 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 THAP11Q96EK4 314 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 SEC16BQ96JE7 1060 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 TRAPPC9Q96Q05 1148 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 GFM1Q96RP9 751 aaKnown RBP8.06□□□□□ -1.12
RBM39-208ENST00000416108 HBEGFQ99075 208 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 MTERF1Q99551 399 aaKnown RBP8.06□□□□□ -1.12
RBM39-208ENST00000416108 SERPINI1Q99574 410 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 ZFYVE21Q9BQ24 234 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 NLNQ9BYT8 704 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 BRF2Q9HAW0 419 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 FANCEQ9HB96 536 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 PDE7BQ9NP56 450 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 PARD6AQ9NPB6 346 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 MRGBPQ9NV56 204 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 AHSPQ9NZD4 102 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 SLC12A4Q9UP95 1085 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 KLHL20Q9Y2M5 609 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 TSC22D4Q9Y3Q8 395 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 U3KQA8 63 aa8.06□□□□□ -1.12
RBM39-208ENST00000416108 MN1Q10571 1320 aaPredicted RBP8.05□□□□□ -1.12
RBM39-208ENST00000416108 OTOGLQ3ZCN5 2332 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 ATP6AP2A0A1C7CYW4 349 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 URADA6NGE7 173 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 SLC9B1P1A6NJY1 282 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 A8MU76 341 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 MAGEB17A8MXT2 336 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 PROB1E7EW31 1015 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 FOXE1O00358 373 aaPredicted RBP8.05□□□□□ -1.12
RBM39-208ENST00000416108 SDHDO14521 159 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 CLEC3AO75596 197 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 ATP6AP2O75787 350 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 RSL1D1O76021 490 aaKnown RBP8.05□□□□□ -1.12
RBM39-208ENST00000416108 ZBTB11O95625 1053 aaPredicted RBP8.05□□□□□ -1.12
RBM39-208ENST00000416108 GP1BAP07359 652 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 CD59P13987 128 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 ST6GAL1P15907 406 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 ACP1P24666 158 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 EPHA3P29320 983 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 CSF2RBP32927 897 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 SEPHS1P49903 392 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 NEK2P51955 445 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 STXBP1P61764 594 aaKnown RBP8.05□□□□□ -1.12
RBM39-208ENST00000416108 RPS13P62277 151 aaKnown RBP8.05□□□□□ -1.12
RBM39-208ENST00000416108 RPL38P63173 70 aaKnown RBP8.05□□□□□ -1.12
RBM39-208ENST00000416108 E2F1Q01094 437 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 ACSM2AQ08AH3 577 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 RPS6KA2Q15349 733 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 UGT3A2Q3SY77 523 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 SLC9B1Q4ZJI4 515 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 CCDC157Q569K6 752 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 STPG1Q5TH74 334 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 ACSM2BQ68CK6 577 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 FCRL6Q6DN72 434 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 CYB5D1Q6P9G0 228 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 MAVSQ7Z434 540 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 PRSS42Q7Z5A4 293 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 ASPGQ86U10 573 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 KMT5CQ86Y97 462 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 PLD3Q8IV08 490 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 CAMKVQ8NCB2 501 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 HUS1BQ8NHY5 278 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 ACTRT2Q8TDY3 377 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 CMTM7Q96FZ5 175 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 TCTN2Q96GX1 697 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 EBF4Q9BQW3 602 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 TWSG1Q9GZX9 223 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 SPNS1Q9H2V7 528 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 RHBGQ9H310 441 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 TUBB1Q9H4B7 451 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 WDR55Q9H6Y2 383 aaPredicted RBP8.05□□□□□ -1.12
RBM39-208ENST00000416108 LRTM1Q9HBL6 345 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 DMRT3Q9NQL9 472 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 RXFP3Q9NSD7 469 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 FARSBQ9NSD9 589 aaKnown RBP8.05□□□□□ -1.12
RBM39-208ENST00000416108 VPS29Q9UBQ0 182 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 ZFP69BQ9UJL9 534 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 ATXN7L1Q9ULK2 861 aaPredicted RBP8.05□□□□□ -1.12
RBM39-208ENST00000416108 EIF3LQ9Y262 564 aaKnown RBP8.05□□□□□ -1.12
RBM39-208ENST00000416108 PCDHGA4Q9Y5G9 962 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 PTGDR2Q9Y5Y4 395 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 PCNX2A6NKB5 2137 aa8.05□□□□□ -1.12
RBM39-208ENST00000416108 IGKV1-8A0A0C4DH67 115 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms