RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 ZSCAN9O15535 394 aaPredicted RBP11.18□□□□□ -0.62
RFFL-205ENST00000415395 KCNH1O95259 989 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 SNAP29O95721 258 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 OCM2P0CE71 109 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 OCMP0CE72 109 aaPredicted RBP11.18□□□□□ -0.62
RFFL-205ENST00000415395 EBLN1P0CF75 366 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 NCK1P16333 377 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 PBLDP30039 288 aaPredicted RBP11.18□□□□□ -0.62
RFFL-205ENST00000415395 IGFALSP35858 605 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 SLC6A12P48065 614 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 STARD6P59095 220 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 UFM1P61960 85 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 PHEXP78562 749 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 DMPKQ09013 629 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 NFATC3Q12968 1075 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 IL18R1Q13478 541 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 PAGE3Q5JUK9 113 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 C6orf136Q5SQH8 315 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 UNC5DQ6UXZ4 953 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 RIMKLAQ8IXN7 391 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 CFAP206Q8IYR0 622 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 MINDY2Q8NBR6 621 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 GLB1L3Q8NCI6 653 aaPredicted RBP11.18□□□□□ -0.62
RFFL-205ENST00000415395 OR52E4Q8NGH9 312 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 ITPKCQ96DU7 683 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 RBM4BQ9BQ04 359 aaKnown RBP11.18□□□□□ -0.62
RFFL-205ENST00000415395 TIMM29Q9BSF4 260 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 RBM4Q9BWF3 364 aaKnown RBP11.18□□□□□ -0.62
RFFL-205ENST00000415395 RAD21L1Q9H4I0 556 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 IPPKQ9H8X2 491 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 GORASP2Q9H8Y8 452 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 USE1Q9NZ43 259 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 GMPR2Q9P2T1 348 aaKnown RBP11.18□□□□□ -0.62
RFFL-205ENST00000415395 DNAJB9Q9UBS3 223 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 ITGB1BP2Q9UKP3 347 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 PSME2Q9UL46 239 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 EIF3LQ9Y262 564 aaKnown RBP11.18□□□□□ -0.62
RFFL-205ENST00000415395 SLC17A4Q9Y2C5 497 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 A0A1W2PPW3 197 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 CACNB4O00305 520 aaPredicted RBP11.18□□□□□ -0.62
RFFL-205ENST00000415395 PPP6CO00743 305 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 OR7A17O14581 309 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 SCELO95171 688 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 PORP16435 677 aaPredicted RBP11.18□□□□□ -0.62
RFFL-205ENST00000415395 GGT1P19440 569 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 CD72P21854 359 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 NUDT1P36639 197 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 MAGEA8P43361 318 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 PREPP48147 710 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 KIAA1024LP59773 190 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 TRAF3Q13114 568 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 RGS21Q2M5E4 152 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 GGTA1PQ4G0N0 100 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 FBXO48Q5FWF7 155 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 CRTC3Q6UUV7 619 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 KIAA2013Q8IYS2 634 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 FAM9CQ8IZT9 166 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 ZBTB8BQ8NAP8 495 aaPredicted RBP11.18□□□□□ -0.62
RFFL-205ENST00000415395 ESAMQ96AP7 390 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 SCARF2Q96GP6 870 aaPredicted RBP11.18□□□□□ -0.62
RFFL-205ENST00000415395 PHF12Q96QT6 1004 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 CGREF1Q99674 301 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 APOOQ9BUR5 198 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 LGR4Q9BXB1 951 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 OSBPL10Q9BXB5 764 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 WDR12Q9GZL7 423 aaKnown RBP11.18□□□□□ -0.62
RFFL-205ENST00000415395 FANCEQ9HB96 536 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 TRPS1Q9UHF7 1281 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 C3orf18Q9UK00 162 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 ZNF225Q9UK10 706 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 ACSL5Q9ULC5 683 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 TMEM98Q9Y2Y6 226 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 TIMM22Q9Y584 194 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 PCDHGA11Q9Y5H2 935 aa11.18□□□□□ -0.62
RFFL-205ENST00000415395 ASPDHA6ND91 283 aa11.17□□□□□ -0.62
RFFL-205ENST00000415395 PRR23AA6NEV1 266 aa11.17□□□□□ -0.62
RFFL-205ENST00000415395 G3V2T6 193 aa11.17□□□□□ -0.62
RFFL-205ENST00000415395 KPNA4O00629 521 aaPredicted RBP11.17□□□□□ -0.62
RFFL-205ENST00000415395 GNGT2O14610 69 aa11.17□□□□□ -0.62
RFFL-205ENST00000415395 LATO43561 262 aa11.17□□□□□ -0.62
RFFL-205ENST00000415395 UGDHO60701 494 aa11.17□□□□□ -0.62
RFFL-205ENST00000415395 CLPXO76031 633 aa11.17□□□□□ -0.62
RFFL-205ENST00000415395 WDR47O94967 919 aa11.17□□□□□ -0.62
RFFL-205ENST00000415395 OR4F21O95013 312 aa11.17□□□□□ -0.62
RFFL-205ENST00000415395 C1orf105O95561 183 aa11.17□□□□□ -0.62
RFFL-205ENST00000415395 RPN2P04844 631 aa11.17□□□□□ -0.62
RFFL-205ENST00000415395 ALPLP05186 524 aa11.17□□□□□ -0.62
RFFL-205ENST00000415395 HNRNPA2B1P22626 353 aaKnown RBP11.17□□□□□ -0.62
RFFL-205ENST00000415395 KELP23276 732 aa11.17□□□□□ -0.62
RFFL-205ENST00000415395 JAK1P23458 1154 aa11.17□□□□□ -0.62
RFFL-205ENST00000415395 HRH2P25021 359 aa11.17□□□□□ -0.62
RFFL-205ENST00000415395 ACADLP28330 430 aa11.17□□□□□ -0.62
RFFL-205ENST00000415395 PDHA2P29803 388 aa11.17□□□□□ -0.62
RFFL-205ENST00000415395 ARL1P40616 181 aaPredicted RBP11.17□□□□□ -0.62
RFFL-205ENST00000415395 ERVPABLB-1P60509 514 aa11.17□□□□□ -0.62
RFFL-205ENST00000415395 PPP2CBP62714 309 aa11.17□□□□□ -0.62
RFFL-205ENST00000415395 PPP2CAP67775 309 aa11.17□□□□□ -0.62
RFFL-205ENST00000415395 ABRQ12979 859 aa11.17□□□□□ -0.62
RFFL-205ENST00000415395 ZNF846Q147U1 533 aa11.17□□□□□ -0.62
RFFL-205ENST00000415395 C18orf21Q32NC0 220 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms