RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 RPS15AP62244 130 aaKnown RBP12.72□□□□□ -0.37
CNN3-203ENST00000415017 INSM1Q01101 510 aaPredicted RBP12.72□□□□□ -0.37
CNN3-203ENST00000415017 MEF2AQ02078 507 aaPredicted RBP12.72□□□□□ -0.37
CNN3-203ENST00000415017 HYAL2Q12891 473 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 ADPRMQ3LIE5 342 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 XKR7Q5GH72 579 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 SH2D4BQ5SQS7 431 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 CLEC6AQ6EIG7 209 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 MED27Q6P2C8 311 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 MAVSQ7Z434 540 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 VN1R4Q7Z5H5 301 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 CRLF3Q8IUI8 442 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 KIAA2013Q8IYS2 634 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 KRT78Q8N1N4 520 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 ARHGEF39Q8N4T4 335 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 MFSD9Q8NBP5 474 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 DEFB124Q8NES8 71 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 CREB3L4Q8TEY5 395 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 ZNF473Q8WTR7 871 aaKnown RBP12.72□□□□□ -0.37
CNN3-203ENST00000415017 CHMP6Q96FZ7 201 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 MAELQ96JY0 434 aaKnown RBP12.72□□□□□ -0.37
CNN3-203ENST00000415017 FAR2Q96K12 515 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 CCT7Q99832 543 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 SHCBP1LQ9BZQ2 653 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 KCNK13Q9HB14 408 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 ABCF3Q9NUQ8 709 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 SIDT1Q9NXL6 827 aaKnown RBP12.72□□□□□ -0.37
CNN3-203ENST00000415017 VTI1BQ9UEU0 232 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 ADGRE2Q9UHX3 823 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 ZFP69BQ9UJL9 534 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 TIMM22Q9Y584 194 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 GMNCA6NCL1 334 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 HDAC3O15379 428 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 SRPX2O60687 465 aaPredicted RBP12.71□□□□□ -0.37
CNN3-203ENST00000415017 CLEC3AO75596 197 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 KRT6AP02538 564 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 KRT6BP04259 564 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 JUNP05412 331 aaKnown RBP12.71□□□□□ -0.37
CNN3-203ENST00000415017 HSD3B1P14060 373 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 DRD4P21917 467 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 HSD3B2P26439 372 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 SERPINB3P29508 390 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 KRT6CP48668 564 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 SEC24CP53992 1094 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 GNGT1P63211 74 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 HSD11B2P80365 405 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 SPIDRQ14159 915 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 ABRAXAS2Q15018 415 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 CPSF6Q16630 551 aaKnown RBP eCLIP12.71□□□□□ -0.37
CNN3-203ENST00000415017 HIST2H2ACQ16777 129 aaPredicted RBP12.71□□□□□ -0.37
CNN3-203ENST00000415017 TCHHL1Q5QJ38 904 aaPredicted RBP12.71□□□□□ -0.37
CNN3-203ENST00000415017 CACHD1Q5VU97 1274 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 HIST2H2AA3Q6FI13 130 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 ADNP2Q6IQ32 1131 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 Q6ZSR9 355 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 FAM47EQ6ZV65 393 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 WDR75Q8IWA0 830 aaKnown RBP12.71□□□□□ -0.37
CNN3-203ENST00000415017 TTLQ8NG68 377 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 REPS1Q96D71 796 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 C11orf24Q96F05 449 aaPredicted RBP12.71□□□□□ -0.37
CNN3-203ENST00000415017 ZFYVE21Q9BQ24 234 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 SIKE1Q9BRV8 207 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 AICDAQ9GZX7 198 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 MEAF6Q9HAF1 191 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 BRF2Q9HAW0 419 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 FGFR1OP2Q9NVK5 253 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 SNX6Q9UNH7 406 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 KNTC1P50748 2209 aa12.71□□□□□ -0.37
CNN3-203ENST00000415017 FER1L5A0AVI2 2057 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 FEZF1A0PJY2 475 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 FITM1A5D6W6 292 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 GIPC1O14908 333 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 ULK1O75385 1050 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 PDYNP01213 254 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 PRR35P0CG20 571 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 SMIM10L1P0DMW3 83 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 HMOX2P30519 316 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 GRK3P35626 688 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 ARFIP1P53367 373 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 BTKQ06187 659 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 CSTF3Q12996 717 aaKnown RBP12.7□□□□□ -0.38
CNN3-203ENST00000415017 ZC3H12BQ5HYM0 836 aaKnown RBP12.7□□□□□ -0.38
CNN3-203ENST00000415017 MANEAQ5SRI9 462 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 FRMPD2BQ6IN97 320 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 EPGNQ6UW88 154 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 B3GNT8Q7Z7M8 397 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 PLD3Q8IV08 490 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.7□□□□□ -0.38
CNN3-203ENST00000415017 BMPERQ8N8U9 685 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 GBP7Q8N8V2 638 aaPredicted RBP12.7□□□□□ -0.38
CNN3-203ENST00000415017 HUS1BQ8NHY5 278 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 NT5CQ8TCD5 201 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 TWIST2Q8WVJ9 160 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 SMIM10Q96HG1 83 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 CCDC74BQ96LY2 380 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 MS4A8Q9BY19 250 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 SLC6A16Q9GZN6 736 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 EPN3Q9H201 632 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 PDE7BQ9NP56 450 aa12.7□□□□□ -0.38
CNN3-203ENST00000415017 DMRT3Q9NQL9 472 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms