RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 ANKRD49Q8WVL7 239 aa10.66□□□□□ -0.7
RFFL-204ENST00000414419 SLC13A3Q8WWT9 602 aa10.66□□□□□ -0.7
RFFL-204ENST00000414419 GPR22Q99680 433 aa10.66□□□□□ -0.7
RFFL-204ENST00000414419 DERL2Q9GZP9 239 aa10.66□□□□□ -0.7
RFFL-204ENST00000414419 TSPYL1Q9H0U9 437 aa10.66□□□□□ -0.7
RFFL-204ENST00000414419 CAB39LQ9H9S4 337 aa10.66□□□□□ -0.7
RFFL-204ENST00000414419 MKKSQ9NPJ1 570 aaPredicted RBP10.66□□□□□ -0.7
RFFL-204ENST00000414419 C14orf105Q9NVL8 296 aa10.66□□□□□ -0.7
RFFL-204ENST00000414419 IKZF3Q9UKT9 509 aa10.66□□□□□ -0.7
RFFL-204ENST00000414419 SH2B3Q9UQQ2 575 aa10.66□□□□□ -0.7
RFFL-204ENST00000414419 OARD1Q9Y530 152 aa10.66□□□□□ -0.7
RFFL-204ENST00000414419 KCNE2Q9Y6J6 123 aa10.66□□□□□ -0.7
RFFL-204ENST00000414419 H0YIG0 161 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 PYCARD-AS1I3L0S3 204 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 PHGDHO43175 533 aaKnown RBP10.65□□□□□ -0.7
RFFL-204ENST00000414419 OR1F1O43749 312 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 LCMT2O60294 686 aaKnown RBP10.65□□□□□ -0.7
RFFL-204ENST00000414419 DPM1O60762 260 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 PDGFAP04085 211 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 SERPIND1P05546 499 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 HEXBP07686 556 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 ITGA3P26006 1051 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 PHBP35232 272 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 SLC26A3P40879 764 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 BCL6P41182 706 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 EMP2P54851 167 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 RAB10P61026 200 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 ATP6V0D1P61421 351 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 CDKL1Q00532 357 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 MEF2AQ02078 507 aaPredicted RBP10.65□□□□□ -0.7
RFFL-204ENST00000414419 KCNC4Q03721 635 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 AIMP2Q13155 320 aaKnown RBP10.65□□□□□ -0.7
RFFL-204ENST00000414419 RAPSNQ13702 412 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 SLMAPQ14BN4 828 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 PPP1R3AQ16821 1122 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 TUBB8Q3ZCM7 444 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 VWA2Q5GFL6 755 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 MFSD9Q8NBP5 474 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 ABHD11Q8NFV4 315 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 SLC5A11Q8WWX8 675 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 IFT81Q8WYA0 676 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 TSNARE1Q96NA8 513 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 AIF1LQ9BQI0 150 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 MCMBPQ9BTE3 642 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 NUDT9Q9BW91 350 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 UNKQ9C0B0 810 aaKnown RBP10.65□□□□□ -0.7
RFFL-204ENST00000414419 EPN3Q9H201 632 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 SYNPO2LQ9H987 977 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 ANKHQ9HCJ1 492 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 MLXIPLQ9NP71 852 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 C3orf18Q9UK00 162 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 FBXL4Q9UKA2 621 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 SLC22A14Q9Y267 594 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 MAP4K5Q9Y4K4 846 aa10.65□□□□□ -0.7
RFFL-204ENST00000414419 PCSK5Q92824 1860 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 NBASA2RRP1 2371 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 IGLV3-12A0A075B6K2 115 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 TRBC2A0A5B9 178 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 NCF1BA6NI72 391 aaPredicted RBP10.64□□□□□ -0.71
RFFL-204ENST00000414419 NCF1CA8MVU1 366 aaPredicted RBP10.64□□□□□ -0.71
RFFL-204ENST00000414419 SOCS6O14544 535 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 MAP2K7O14733 419 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 FFAR3O14843 346 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 GPR42O15529 346 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 FOXS1O43638 330 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 H2AFYO75367 372 aaKnown RBP10.64□□□□□ -0.71
RFFL-204ENST00000414419 IPO13O94829 963 aaKnown RBP10.64□□□□□ -0.71
RFFL-204ENST00000414419 WDR47O94967 919 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 WISP1O95388 367 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 S100BP04271 92 aaPredicted RBP10.64□□□□□ -0.71
RFFL-204ENST00000414419 NCF1P14598 390 aaPredicted RBP10.64□□□□□ -0.71
RFFL-204ENST00000414419 ACPPP15309 386 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 SKP1P63208 163 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 RGS1Q08116 209 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 MYBPC3Q14896 1274 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 TGFBIQ15582 683 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 ZXDCQ2QGD7 858 aaPredicted RBP10.64□□□□□ -0.71
RFFL-204ENST00000414419 GLE1Q53GS7 698 aaKnown RBP10.64□□□□□ -0.71
RFFL-204ENST00000414419 COLEC12Q5KU26 742 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 CATSPEREQ5SY80 951 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 MFSD4BQ5TF39 518 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 VWA5B1Q5TIE3 1220 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 KIRREL2Q6UWL6 708 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 VN1R4Q7Z5H5 301 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 TBC1D1Q86TI0 1168 aaPredicted RBP10.64□□□□□ -0.71
RFFL-204ENST00000414419 GPSM1Q86YR5 675 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 TMEM151BQ8IW70 566 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 TCAIMQ8N3R3 496 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 SPATA6LQ8N4H0 392 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 OR4K1Q8NGD4 311 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 OR9A4Q8NGU2 314 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 ZCCHC10Q8TBK6 192 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 TM9SF4Q92544 642 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 NEIL2Q969S2 332 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 TM4SF19Q96DZ7 209 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 MRRFQ96E11 262 aaKnown RBP10.64□□□□□ -0.71
RFFL-204ENST00000414419 OR4K3Q96R72 315 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 SMAD5Q99717 465 aaKnown RBP10.64□□□□□ -0.71
RFFL-204ENST00000414419 MACROD1Q9BQ69 325 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 CAPS2Q9BXY5 557 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms