RNA–Protein interactions for RNA: ENST00000414416.2

LINC00116-201, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene LINC00116, Length 2,051 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-201ENST00000414416 PRAMEF9Q5VWM5 478 aa14.77□□□□□ -0.05
LINC00116-201ENST00000414416 GPRIN3Q6ZVF9 776 aa14.77□□□□□ -0.05
LINC00116-201ENST00000414416 TMPRSS9Q7Z410 1059 aa14.77□□□□□ -0.05
LINC00116-201ENST00000414416 OR4D9Q8NGE8 314 aa14.77□□□□□ -0.05
LINC00116-201ENST00000414416 AGAP11Q8TF27 550 aa14.77□□□□□ -0.05
LINC00116-201ENST00000414416 PTCD3Q96EY7 689 aaKnown RBP14.77□□□□□ -0.05
LINC00116-201ENST00000414416 PELI2Q9HAT8 420 aa14.77□□□□□ -0.05
LINC00116-201ENST00000414416 TMEM184CQ9NVA4 438 aa14.77□□□□□ -0.05
LINC00116-201ENST00000414416 ARL8BQ9NVJ2 186 aa14.77□□□□□ -0.05
LINC00116-201ENST00000414416 CHCHD3Q9NX63 227 aaKnown RBP14.77□□□□□ -0.05
LINC00116-201ENST00000414416 CDV3Q9UKY7 258 aaKnown RBP14.77□□□□□ -0.05
LINC00116-201ENST00000414416 SNX7Q9UNH6 387 aa14.77□□□□□ -0.05
LINC00116-201ENST00000414416 GVINP1Q7Z2Y8 2422 aa14.76□□□□□ -0.05
LINC00116-201ENST00000414416 D6RAR5 112 aa14.76□□□□□ -0.05
LINC00116-201ENST00000414416 SLC30A4O14863 429 aa14.76□□□□□ -0.05
LINC00116-201ENST00000414416 TM4SF5O14894 197 aa14.76□□□□□ -0.05
LINC00116-201ENST00000414416 HDAC3O15379 428 aa14.76□□□□□ -0.05
LINC00116-201ENST00000414416 UGDHO60701 494 aa14.76□□□□□ -0.05
LINC00116-201ENST00000414416 WFS1O76024 890 aa14.76□□□□□ -0.05
LINC00116-201ENST00000414416 CLDN9O95484 217 aa14.76□□□□□ -0.05
LINC00116-201ENST00000414416 ESRRBO95718 433 aa14.76□□□□□ -0.05
LINC00116-201ENST00000414416 EPHA3P29320 983 aa14.76□□□□□ -0.05
LINC00116-201ENST00000414416 UBAP2LQ14157 1087 aaKnown RBP14.76□□□□□ -0.05
LINC00116-201ENST00000414416 TBCCQ15814 346 aa14.76□□□□□ -0.05
LINC00116-201ENST00000414416 CACHD1Q5VU97 1274 aa14.76□□□□□ -0.05
LINC00116-201ENST00000414416 LIPJQ5W064 366 aa14.76□□□□□ -0.05
LINC00116-201ENST00000414416 SYVN1Q86TM6 617 aa14.76□□□□□ -0.05
LINC00116-201ENST00000414416 TREML1Q86YW5 311 aa14.76□□□□□ -0.05
LINC00116-201ENST00000414416 CARFQ8N187 725 aa14.76□□□□□ -0.05
LINC00116-201ENST00000414416 GBP7Q8N8V2 638 aaPredicted RBP14.76□□□□□ -0.05
LINC00116-201ENST00000414416 OR4F6Q8NGB9 312 aa14.76□□□□□ -0.05
LINC00116-201ENST00000414416 ZUFSPQ96AP4 578 aa14.76□□□□□ -0.05
LINC00116-201ENST00000414416 TRAPPC9Q96Q05 1148 aa14.76□□□□□ -0.05
LINC00116-201ENST00000414416 KLHL25Q9H0H3 589 aa14.76□□□□□ -0.05
LINC00116-201ENST00000414416 TOR4AQ9NXH8 423 aa14.76□□□□□ -0.05
LINC00116-201ENST00000414416 ANKMY1Q9P2S6 941 aa14.76□□□□□ -0.05
LINC00116-201ENST00000414416 ZNF225Q9UK10 706 aa14.76□□□□□ -0.05
LINC00116-201ENST00000414416 APOBEC2Q9Y235 224 aaKnown RBP14.76□□□□□ -0.05
LINC00116-201ENST00000414416 KLK4Q9Y5K2 254 aa14.76□□□□□ -0.05
LINC00116-201ENST00000414416 SNRNP200O75643 2136 aaKnown RBP14.75□□□□□ -0.05
LINC00116-201ENST00000414416 IGHV5-51A0A0C4DH38 117 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 SKAP2O75563 359 aaPredicted RBP14.75□□□□□ -0.05
LINC00116-201ENST00000414416 ST6GAL1P15907 406 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 CASP2P42575 452 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 ERVPABLB-1P60509 514 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 BLMHQ13867 455 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 CLEC6AQ6EIG7 209 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 LETMD1Q6P1Q0 360 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 FIGLAQ6QHK4 219 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 ZNF574Q6ZN55 896 aaPredicted RBP14.75□□□□□ -0.05
LINC00116-201ENST00000414416 FAM129CQ86XR2 697 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 L3MBTL4Q8NA19 623 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 OR4K1Q8NGD4 311 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 WDR34Q96EX3 536 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 MAGEB10Q96LZ2 347 aaPredicted RBP14.75□□□□□ -0.05
LINC00116-201ENST00000414416 AIF1LQ9BQI0 150 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 EFCAB11Q9BUY7 163 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 RNF11Q9Y3C5 154 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 SLC9B1P1A6NJY1 282 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 PCNX2A6NKB5 2137 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 A8MU76 341 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 TOX3O15405 576 aaPredicted RBP14.75□□□□□ -0.05
LINC00116-201ENST00000414416 OR4F21O95013 312 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 CD22P20273 847 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 CXCR2P25025 360 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 GRK3P35626 688 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 FOXA1P55317 472 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 CSNK1G2P78368 415 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 MEF2AQ02078 507 aaPredicted RBP14.75□□□□□ -0.05
LINC00116-201ENST00000414416 LAPTM5Q13571 262 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 E2F2Q14209 437 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 SLBPQ14493 270 aaKnown RBP eCLIP14.75□□□□□ -0.05
LINC00116-201ENST00000414416 PAGE2BQ5JRK9 111 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 GRHL2Q6ISB3 625 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 ZNF425Q6IV72 752 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 PRSS42Q7Z5A4 293 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 C19orf47Q8N9M1 422 aaKnown RBP14.75□□□□□ -0.05
LINC00116-201ENST00000414416 DTNBP1Q96EV8 351 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 PDP2Q9P2J9 529 aa14.75□□□□□ -0.05
LINC00116-201ENST00000414416 PTPRZ1P23471 2315 aaPredicted RBP14.74□□□□□ -0.05
LINC00116-201ENST00000414416 IGHV5-10-1A0A0J9YXX1 117 aa14.74□□□□□ -0.05
LINC00116-201ENST00000414416 OR2A25A4D2G3 310 aa14.74□□□□□ -0.05
LINC00116-201ENST00000414416 E9PBE3 544 aa14.74□□□□□ -0.05
LINC00116-201ENST00000414416 NRP2O60462 931 aa14.74□□□□□ -0.05
LINC00116-201ENST00000414416 KLHL41O60662 606 aa14.74□□□□□ -0.05
LINC00116-201ENST00000414416 ZBTB11O95625 1053 aaPredicted RBP14.74□□□□□ -0.05
LINC00116-201ENST00000414416 SERPINA6P08185 405 aa14.74□□□□□ -0.05
LINC00116-201ENST00000414416 THRAP10827 490 aa14.74□□□□□ -0.05
LINC00116-201ENST00000414416 CEACAM1P13688 526 aa14.74□□□□□ -0.05
LINC00116-201ENST00000414416 HGFP14210 728 aa14.74□□□□□ -0.05
LINC00116-201ENST00000414416 JUPP14923 745 aa14.74□□□□□ -0.05
LINC00116-201ENST00000414416 HNF4AP41235 474 aa14.74□□□□□ -0.05
LINC00116-201ENST00000414416 CPSF6Q16630 551 aaKnown RBP eCLIP14.74□□□□□ -0.05
LINC00116-201ENST00000414416 HIST2H2ACQ16777 129 aaPredicted RBP14.74□□□□□ -0.05
LINC00116-201ENST00000414416 GGTA1PQ4G0N0 100 aa14.74□□□□□ -0.05
LINC00116-201ENST00000414416 FCRL6Q6DN72 434 aa14.74□□□□□ -0.05
LINC00116-201ENST00000414416 HIST2H2AA3Q6FI13 130 aa14.74□□□□□ -0.05
LINC00116-201ENST00000414416 PAQR7Q86WK9 346 aa14.74□□□□□ -0.05
LINC00116-201ENST00000414416 KRT78Q8N1N4 520 aa14.74□□□□□ -0.05
LINC00116-201ENST00000414416 CDYL2Q8N8U2 506 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms