RNA–Protein interactions for RNA: ENST00000414317.6

SNCAIP-206, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-206ENST00000414317 PDK4Q16654 411 aa12.85□□□□□ -0.35
SNCAIP-206ENST00000414317 PFKFB4Q16877 469 aa12.85□□□□□ -0.35
SNCAIP-206ENST00000414317 NKAIN1Q4KMZ8 207 aa12.85□□□□□ -0.35
SNCAIP-206ENST00000414317 GARNL3Q5VVW2 1013 aa12.85□□□□□ -0.35
SNCAIP-206ENST00000414317 FAM198BQ6UWH4 519 aa12.85□□□□□ -0.35
SNCAIP-206ENST00000414317 VN1R4Q7Z5H5 301 aa12.85□□□□□ -0.35
SNCAIP-206ENST00000414317 LCA5Q86VQ0 697 aa12.85□□□□□ -0.35
SNCAIP-206ENST00000414317 SNX31Q8N9S9 440 aa12.85□□□□□ -0.35
SNCAIP-206ENST00000414317 MFSD9Q8NBP5 474 aa12.85□□□□□ -0.35
SNCAIP-206ENST00000414317 CAMKVQ8NCB2 501 aa12.85□□□□□ -0.35
SNCAIP-206ENST00000414317 EPS8L3Q8TE67 593 aaKnown RBP12.85□□□□□ -0.35
SNCAIP-206ENST00000414317 MZB1Q8WU39 189 aa12.85□□□□□ -0.35
SNCAIP-206ENST00000414317 UBTD2Q8WUN7 234 aa12.85□□□□□ -0.35
SNCAIP-206ENST00000414317 RUFY1Q96T51 708 aa12.85□□□□□ -0.35
SNCAIP-206ENST00000414317 MRPL57Q9BQC6 102 aaKnown RBP12.85□□□□□ -0.35
SNCAIP-206ENST00000414317 IFT80Q9P2H3 777 aaPredicted RBP12.85□□□□□ -0.35
SNCAIP-206ENST00000414317 CPSF2Q9P2I0 782 aaKnown RBP12.85□□□□□ -0.35
SNCAIP-206ENST00000414317 XPR1Q9UBH6 696 aa12.85□□□□□ -0.35
SNCAIP-206ENST00000414317 OPTCQ9UBM4 332 aa12.85□□□□□ -0.35
SNCAIP-206ENST00000414317 GPN3Q9UHW5 284 aaPredicted RBP12.85□□□□□ -0.35
SNCAIP-206ENST00000414317 LHX6Q9UPM6 363 aa12.85□□□□□ -0.35
SNCAIP-206ENST00000414317 SCN3AQ9NY46 2000 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 GOLGA8RI6L899 631 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 K7EPI3 171 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 KLK8O60259 260 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 H2AFYO75367 372 aaKnown RBP12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 CAPN1P07384 714 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 ATXN8OSP0DMR3 200 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 C1GALT1C1LP0DN25 315 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 PYGBP11216 843 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 PIM1P11309 404 aaPredicted RBP12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 KRT15P19012 456 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 CXCR2P25025 360 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 REEP5Q00765 189 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 IFFO1Q0D2I5 559 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 SETDB1Q15047 1291 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 NCF4Q15080 339 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 MLIPQ5VWP3 458 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 ATG9BQ674R7 924 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 PRMT9Q6P2P2 845 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 SLCO4C1Q6ZQN7 724 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 ASPGQ86U10 573 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 ENDOVQ8N8Q3 282 aaKnown RBP12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 ZNF740Q8NDX6 193 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 OR2W6PQ8NHA6 318 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 SLC13A3Q8WWT9 602 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 TM4SF19Q96DZ7 209 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 C10orf90Q96M02 699 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 SPNS1Q9H2V7 528 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 MRPL46Q9H2W6 279 aaKnown RBP12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 ACTL8Q9H568 366 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 TMCO1Q9UM00 188 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 ASB1Q9Y576 335 aa12.84□□□□□ -0.35
SNCAIP-206ENST00000414317 TLDC2A0PJX2 215 aa12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 TK2O00142 265 aa12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 NKX2-8O15522 239 aa12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 SMIM24O75264 130 aa12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 CREG1O75629 220 aa12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 MED26O95402 600 aa12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 ONECUT2O95948 504 aa12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 STATHP02808 62 aa12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 CD63P08962 238 aa12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 SLC35G6P0C7Q6 338 aa12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 VARSP26640 1264 aaKnown RBP12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 AHRP35869 848 aa12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 SCTRP47872 440 aa12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 RPS18P62269 152 aaKnown RBP12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 CYP4F2P78329 520 aa12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 SLC9A5Q14940 896 aa12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 RBBP5Q15291 538 aaKnown RBP12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 NDUFA9Q16795 377 aa12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 CRTC2Q53ET0 693 aaPredicted RBP12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 C16orf46Q6P387 395 aa12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 SYVN1Q86TM6 617 aa12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 MREGQ8N565 214 aa12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 METTL27Q8N6F8 245 aaPredicted RBP12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 MVB12AQ96EY5 273 aa12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 EHD1Q9H4M9 534 aa12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 GEMIN8Q9NWZ8 242 aaKnown RBP12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 ZFP69BQ9UJL9 534 aa12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 CDC14AQ9UNH5 594 aa12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 PADI2Q9Y2J8 665 aa12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 ANGPTL3Q9Y5C1 460 aa12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 TNPO3Q9Y5L0 923 aaKnown RBP12.83□□□□□ -0.36
SNCAIP-206ENST00000414317 ZFYVE26Q68DK2 2539 aa12.82□□□□□ -0.36
SNCAIP-206ENST00000414317 A0A1W2PPM1 405 aa12.82□□□□□ -0.36
SNCAIP-206ENST00000414317 RECKO95980 971 aa12.82□□□□□ -0.36
SNCAIP-206ENST00000414317 PRKAR1AP10644 381 aa12.82□□□□□ -0.36
SNCAIP-206ENST00000414317 EPB42P16452 691 aa12.82□□□□□ -0.36
SNCAIP-206ENST00000414317 ITGAXP20702 1163 aa12.82□□□□□ -0.36
SNCAIP-206ENST00000414317 OR1D4P47884 311 aa12.82□□□□□ -0.36
SNCAIP-206ENST00000414317 IRF8Q02556 426 aa12.82□□□□□ -0.36
SNCAIP-206ENST00000414317 FAM53BQ14153 422 aa12.82□□□□□ -0.36
SNCAIP-206ENST00000414317 ERV3-1Q14264 604 aa12.82□□□□□ -0.36
SNCAIP-206ENST00000414317 SLBPQ14493 270 aaKnown RBP eCLIP12.82□□□□□ -0.36
SNCAIP-206ENST00000414317 PCBP2Q15366 365 aaKnown RBP eCLIP12.82□□□□□ -0.36
SNCAIP-206ENST00000414317 XKR6Q5GH73 641 aa12.82□□□□□ -0.36
SNCAIP-206ENST00000414317 TMIGD1Q6UXZ0 262 aa12.82□□□□□ -0.36
SNCAIP-206ENST00000414317 CYP4X1Q8N118 509 aa12.82□□□□□ -0.36
SNCAIP-206ENST00000414317 KRT78Q8N1N4 520 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms