RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 CD1DP15813 335 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 MMP11P24347 488 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 SLC26A3P40879 764 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 PGDP52209 483 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 KLC1Q07866 573 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 NAB1Q13506 487 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 RAPSNQ13702 412 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 DSG2Q14126 1118 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 CSHL1Q14406 222 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 SLMAPQ14BN4 828 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 ZKSCAN8Q15776 578 aaPredicted RBP14.08□□□□□ -0.16
LIMS4-201ENST00000413601 NDUFA9Q16795 377 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 GLE1Q53GS7 698 aaKnown RBP14.08□□□□□ -0.16
LIMS4-201ENST00000413601 VWA2Q5GFL6 755 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 DCAF10Q5QP82 559 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 ATG14Q6ZNE5 492 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 CMC1Q7Z7K0 106 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 LAPTM4BQ86VI4 370 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 AMER3Q8N944 861 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 ZNF740Q8NDX6 193 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 FDCSPQ8NFU4 85 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 OR4K1Q8NGD4 311 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 SLC5A11Q8WWX8 675 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 MIEF2Q96C03 454 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 TM4SF19Q96DZ7 209 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 FER1L6-AS2Q96M78 137 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 TRIM4Q9C037 500 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 MLXIPLQ9NP71 852 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 NINJ2Q9NZG7 142 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 TRPC4Q9UBN4 977 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 SLC22A14Q9Y267 594 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 FASNP49327 2511 aaKnown RBP14.08□□□□□ -0.16
LIMS4-201ENST00000413601 ZNF462Q96JM2 2506 aa14.08□□□□□ -0.16
LIMS4-201ENST00000413601 BSNQ9UPA5 3926 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 SOCS6O14544 535 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 PRPF4O43172 522 aaKnown RBP eCLIP14.07□□□□□ -0.16
LIMS4-201ENST00000413601 OR1F1O43749 312 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 ALOX12BO75342 701 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 GDF5P43026 501 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 HNMTP50135 292 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 FAM53BQ14153 422 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 TGFBIQ15582 683 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 OR4D1Q15615 310 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 SYT16Q17RD7 645 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 RAPH1Q70E73 1250 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 PRSS41Q7RTY9 318 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 ASPGQ86U10 573 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 MFSD9Q8NBP5 474 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 CLEC1AQ8NC01 280 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 KCT2Q8NC54 265 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 CAMKVQ8NCB2 501 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 OR9A4Q8NGU2 314 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 SLC13A3Q8WWT9 602 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 RHBDF1Q96CC6 855 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 UBXN10Q96LJ8 280 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 MESP1Q9BRJ9 268 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 CRB3Q9BUF7 120 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 NUDT9Q9BW91 350 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 FAM129AQ9BZQ8 928 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 SPNS1Q9H2V7 528 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 SEMA3GQ9NS98 782 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 ANAPC2Q9UJX6 822 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 FBXL4Q9UKA2 621 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 DYRK1BQ9Y463 629 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 HS3ST3B1Q9Y662 390 aa14.07□□□□□ -0.16
LIMS4-201ENST00000413601 IGLV3-12A0A075B6K2 115 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 TRBC2A0A5B9 178 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 WDR47O94967 919 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 IGHEP01854 428 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 SLC35E2BP0CK96 405 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 ECHS1P30084 290 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 PHBP35232 272 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 AVPR1BP47901 424 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 ATP6V0D1P61421 351 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 MAT1AQ00266 395 aaKnown RBP14.06□□□□□ -0.16
LIMS4-201ENST00000413601 KLRB1Q12918 225 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 DLG1Q12959 904 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 BMPR2Q13873 1038 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 UAP1Q16222 522 aaPredicted RBP14.06□□□□□ -0.16
LIMS4-201ENST00000413601 RBBP7Q16576 425 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 MROH9Q5TGP6 573 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 TMEM214Q6NUQ4 689 aaKnown RBP14.06□□□□□ -0.16
LIMS4-201ENST00000413601 KIRREL2Q6UWL6 708 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 CEP128Q6ZU80 1094 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 GPSM1Q86YR5 675 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 RELL1Q8IUW5 271 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 CEP112Q8N8E3 955 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 TEX19Q8NA77 164 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 ZCCHC10Q8TBK6 192 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 NACC2Q96BF6 587 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 MOCOSQ96EN8 888 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 FMO2Q99518 471 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 SARGQ9BW04 601 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 CDC42EP4Q9H3Q1 356 aaKnown RBP14.06□□□□□ -0.16
LIMS4-201ENST00000413601 MKKSQ9NPJ1 570 aaPredicted RBP14.06□□□□□ -0.16
LIMS4-201ENST00000413601 GPR83Q9NYM4 423 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 C3orf18Q9UK00 162 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 G3BP2Q9UN86 482 aaKnown RBP14.06□□□□□ -0.16
LIMS4-201ENST00000413601 MAP4K5Q9Y4K4 846 aa14.06□□□□□ -0.16
LIMS4-201ENST00000413601 HMX2A2RU54 273 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms