RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 NUP210LQ5VU65 1888 aa6.09□□□□□ -1.44
USP54-202ENST00000413442 A0A087WUV0 522 aaPredicted RBP6.08□□□□□ -1.44
USP54-202ENST00000413442 LOC102723996A0A087X1L8 192 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 LOC105369274A0A096LPK9 316 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 LOC102723532A0A0G2JNH3 316 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 J3QKU1 62 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 UGDHO60701 494 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 BANF1O75531 89 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 CLEC3AO75596 197 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 STK16O75716 305 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 KLHL2O95198 593 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 WISP3O95389 354 aaPredicted RBP6.08□□□□□ -1.44
USP54-202ENST00000413442 HPP00738 406 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 C1QAP02745 245 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 EIF2S1P05198 315 aaKnown RBP6.08□□□□□ -1.44
USP54-202ENST00000413442 TUBBP07437 444 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 LTA4HP09960 611 aaKnown RBP6.08□□□□□ -1.44
USP54-202ENST00000413442 FAM87AP0C7U9 286 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 CD1DP15813 335 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 FBLP22087 321 aaKnown RBP6.08□□□□□ -1.44
USP54-202ENST00000413442 JAK1P23458 1154 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 TYK2P29597 1187 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 BCL6P41182 706 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 TSFMP43897 325 aaKnown RBP6.08□□□□□ -1.44
USP54-202ENST00000413442 SCTRP47872 440 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 CSRP3P50461 194 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 PGDP52209 483 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 EMP2P54851 167 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 CYP4F2P78329 520 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 SRSF6Q13247 344 aaKnown RBP6.08□□□□□ -1.44
USP54-202ENST00000413442 TSTA3Q13630 321 aaPredicted RBP6.08□□□□□ -1.44
USP54-202ENST00000413442 FASTKD3Q14CZ7 662 aaKnown RBP6.08□□□□□ -1.44
USP54-202ENST00000413442 PHKG1Q16816 387 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 TSNAXIP1Q2TAA8 658 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 PTCHD3Q3KNS1 767 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 TUBB8Q3ZCM7 444 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 VWA5B1Q5TIE3 1220 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 FRMPD2BQ6IN97 320 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 TMEM214Q6NUQ4 689 aaKnown RBP6.08□□□□□ -1.44
USP54-202ENST00000413442 RPUSD3Q6P087 351 aaKnown RBP6.08□□□□□ -1.44
USP54-202ENST00000413442 TMEM205Q6UW68 189 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 NXPE4Q6UWF7 544 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 TMEM207Q6UWW9 146 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 ZDHHC24Q6UX98 284 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 ASB18Q6ZVZ8 466 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 RAPH1Q70E73 1250 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 NDUFAF7Q7L592 441 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 ADCK2Q7Z695 626 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 ASPGQ86U10 573 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 ISCA2Q86U28 154 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 CCDC25Q86WR0 208 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 OR4N4Q8N0Y3 316 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 ARHGEF39Q8N4T4 335 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 PPM1NQ8N819 430 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 PDPRQ8NCN5 879 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 PLPP5Q8NEB5 264 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 SLC5A11Q8WWX8 675 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 ZNF592Q92610 1267 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 RHBDF1Q96CC6 855 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 PTCD3Q96EY7 689 aaKnown RBP6.08□□□□□ -1.44
USP54-202ENST00000413442 MMABQ96EY8 250 aaPredicted RBP6.08□□□□□ -1.44
USP54-202ENST00000413442 PWWP2AQ96N64 755 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 SPSB2Q99619 263 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 OLFM1Q99784 485 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 WDR83Q9BRX9 315 aaKnown RBP6.08□□□□□ -1.44
USP54-202ENST00000413442 TUBB6Q9BUF5 446 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 LHPPQ9H008 270 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 ATG10Q9H0Y0 220 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 P4HTMQ9NXG6 502 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 GPR83Q9NYM4 423 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 TEKT2Q9UIF3 430 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 PTBP2Q9UKA9 531 aaKnown RBP6.08□□□□□ -1.44
USP54-202ENST00000413442 ADAMTS6Q9UKP5 1117 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 RUVBL2Q9Y230 463 aaKnown RBP6.08□□□□□ -1.44
USP54-202ENST00000413442 RUVBL1Q9Y265 456 aaKnown RBP6.08□□□□□ -1.44
USP54-202ENST00000413442 MTO1Q9Y2Z2 717 aaKnown RBP6.08□□□□□ -1.44
USP54-202ENST00000413442 PSAT1Q9Y617 370 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 CFAP47Q6ZTR5 3102 aa6.08□□□□□ -1.44
USP54-202ENST00000413442 IGSF10Q6WRI0 2623 aa6.07□□□□□ -1.44
USP54-202ENST00000413442 ANKDD1BA6NHY2 528 aa6.07□□□□□ -1.44
USP54-202ENST00000413442 H3BQF6 201 aa6.07□□□□□ -1.44
USP54-202ENST00000413442 MAP2K7O14733 419 aa6.07□□□□□ -1.44
USP54-202ENST00000413442 HCRTR1O43613 425 aa6.07□□□□□ -1.44
USP54-202ENST00000413442 FOXS1O43638 330 aa6.07□□□□□ -1.44
USP54-202ENST00000413442 OR1F1O43749 312 aa6.07□□□□□ -1.44
USP54-202ENST00000413442 BMP10O95393 424 aa6.07□□□□□ -1.44
USP54-202ENST00000413442 GUCA1CO95843 209 aa6.07□□□□□ -1.44
USP54-202ENST00000413442 HEXBP07686 556 aa6.07□□□□□ -1.44
USP54-202ENST00000413442 INHBAP08476 426 aa6.07□□□□□ -1.44
USP54-202ENST00000413442 ABHD2P08910 425 aa6.07□□□□□ -1.44
USP54-202ENST00000413442 FURINP09958 794 aa6.07□□□□□ -1.44
USP54-202ENST00000413442 SMIM10L1P0DMW3 83 aa6.07□□□□□ -1.44
USP54-202ENST00000413442 EPB42P16452 691 aa6.07□□□□□ -1.44
USP54-202ENST00000413442 ALOX12P18054 663 aa6.07□□□□□ -1.44
USP54-202ENST00000413442 SAT1P21673 171 aa6.07□□□□□ -1.44
USP54-202ENST00000413442 PSMB5P28074 263 aa6.07□□□□□ -1.44
USP54-202ENST00000413442 HNF4AP41235 474 aa6.07□□□□□ -1.44
USP54-202ENST00000413442 MSH2P43246 934 aa6.07□□□□□ -1.44
USP54-202ENST00000413442 SLC6A12P48065 614 aa6.07□□□□□ -1.44
USP54-202ENST00000413442 SERPINB8P50452 374 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms