RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.36■□□□□ 0.53
TNFRSF8-202ENST00000413146 RNF6Q9Y252 685 aa18.36■□□□□ 0.53
TNFRSF8-202ENST00000413146 PCDHGB3Q9Y5G1 929 aa18.36■□□□□ 0.53
TNFRSF8-202ENST00000413146 OBSL1O75147 1896 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 YY2O15391 372 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 C1SP09871 688 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 NUDT7P0C024 238 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 SRCP12931 536 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 CD22P20273 847 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 PPIBP23284 216 aaKnown RBP18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 CD40LGP29965 261 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 AQP1P29972 269 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 MAGEA10P43363 369 aaPredicted RBP18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 TM4SF4P48230 202 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 EPHB3P54753 998 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 C21orf58P58505 322 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 FPGSQ05932 587 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 ELP6Q0PNE2 266 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 CATSPEREQ5SY80 951 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 SERPINA13PQ6UXR4 307 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 SLC22A16Q86VW1 577 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 RHOXF1Q8NHV9 184 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 PSMA8Q8TAA3 256 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 ELMO1Q92556 727 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 ECHDC3Q96DC8 303 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 KCNC2Q96PR1 638 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 CEP44Q9C0F1 390 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 KPNA5O15131 536 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 AIREO43918 545 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 CTSOP43234 321 aaPredicted RBP18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 TUBA1BP68363 451 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 SF1Q15637 639 aaKnown RBP18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 INAVAQ3KP66 663 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 IQCCQ4KMZ1 466 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 MPPE1Q53F39 396 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 CPTPQ5TA50 214 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 TUBA1AQ71U36 451 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 VPS37AQ8NEZ2 397 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 WDR20Q8TBZ3 569 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 MCCC1Q96RQ3 725 aaPredicted RBP18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 HERC2P3Q9BVR0 1158 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 ZDHHC6Q9H6R6 413 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 BRD9Q9H8M2 597 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 ZBTB20Q9HC78 741 aaPredicted RBP18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 SPATA6Q9NWH7 488 aaPredicted RBP18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 ZNF229Q9UJW7 825 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 TMPRSS11EQ9UL52 423 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 VPS4AQ9UN37 437 aa18.35■□□□□ 0.53
TNFRSF8-202ENST00000413146 OLFM2O95897 454 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 LIPAP38571 399 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 SPINT3P49223 89 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 LRRC73Q5JTD7 316 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 BBS7Q8IWZ6 715 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 HPS1Q92902 700 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 CHST8Q9H2A9 424 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 TMEM165Q9HC07 324 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 POLE4Q9NR33 117 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 BTNL2Q9UIR0 455 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 BTBD3Q9Y2F9 522 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 PADI2Q9Y2J8 665 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 PPIL1Q9Y3C6 166 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 SH3BP1Q9Y3L3 701 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 E7EQ34 232 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 E9PQ18 207 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 MTX2O75431 263 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 VIPP01282 170 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 ASMTP46597 345 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 KCNC3Q14003 757 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 TBCEQ15813 527 aaPredicted RBP18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 ZNF404Q494X3 552 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 C22orf39Q6P5X5 142 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 DSG4Q86SJ6 1040 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 THOC6Q86W42 341 aaKnown RBP18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 NPAS3Q8IXF0 933 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 FIBINQ8TAL6 211 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 SPPL2AQ8TCT8 520 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 MYDGFQ969H8 173 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 MAL2Q969L2 176 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 DOHHQ9BU89 302 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 ZNF451Q9Y4E5 1061 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 AP1M2Q9Y6Q5 423 aa18.34■□□□□ 0.53
TNFRSF8-202ENST00000413146 CKMP06732 381 aa18.33■□□□□ 0.53
TNFRSF8-202ENST00000413146 PCGF2P35227 344 aa18.33■□□□□ 0.53
TNFRSF8-202ENST00000413146 EIF2DP41214 584 aaKnown RBP18.33■□□□□ 0.53
TNFRSF8-202ENST00000413146 CRYBA2P53672 197 aa18.33■□□□□ 0.53
TNFRSF8-202ENST00000413146 DOC2AQ14183 400 aa18.33■□□□□ 0.53
TNFRSF8-202ENST00000413146 RGNQ15493 299 aa18.33■□□□□ 0.53
TNFRSF8-202ENST00000413146 TEAD4Q15561 434 aa18.33■□□□□ 0.53
TNFRSF8-202ENST00000413146 Q6ZPB1 254 aaPredicted RBP18.33■□□□□ 0.53
TNFRSF8-202ENST00000413146 KIAA1958Q8N8K9 716 aa18.33■□□□□ 0.53
TNFRSF8-202ENST00000413146 VOPP1Q96AW1 172 aa18.33■□□□□ 0.53
TNFRSF8-202ENST00000413146 MMP27Q9H306 513 aa18.33■□□□□ 0.53
TNFRSF8-202ENST00000413146 CFAP97Q9P2B7 532 aa18.33■□□□□ 0.53
TNFRSF8-202ENST00000413146 FAM8A1Q9UBU6 413 aa18.33■□□□□ 0.53
TNFRSF8-202ENST00000413146 B4GALT6Q9UBX8 382 aa18.33■□□□□ 0.53
TNFRSF8-202ENST00000413146 PSORS1C1Q9UIG5 152 aa18.33■□□□□ 0.53
TNFRSF8-202ENST00000413146 TESMINQ9Y4I5 508 aa18.33■□□□□ 0.53
TNFRSF8-202ENST00000413146 PCDHGA4Q9Y5G9 962 aa18.33■□□□□ 0.53
TNFRSF8-202ENST00000413146 C1orf226A1L170 272 aa18.33■□□□□ 0.52
TNFRSF8-202ENST00000413146 TNFRSF11BO00300 401 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms