RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 PCDHB11Q9Y5F2 797 aa13.09□□□□□ -0.31
LIMS1-205ENST00000410093 COMMD3-BMI1R4GMX3 469 aa13.09□□□□□ -0.31
LIMS1-205ENST00000410093 PCM1Q15154 2024 aa13.09□□□□□ -0.31
LIMS1-205ENST00000410093 A0A087WXM4 84 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 MAGEB17A8MXT2 336 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 PRR33A8MZF0 331 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 CLIC1O00299 241 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 RNASET2O00584 256 aaKnown RBP13.08□□□□□ -0.31
LIMS1-205ENST00000410093 TPST1O60507 370 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 ANXA4P09525 319 aaPredicted RBP13.08□□□□□ -0.31
LIMS1-205ENST00000410093 ERGP11308 486 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 ZNF23P17027 643 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 TACR1P25103 407 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 PTX3P26022 381 aaPredicted RBP13.08□□□□□ -0.31
LIMS1-205ENST00000410093 TAP2Q03519 686 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 ZNF763Q0D2J5 394 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 DAG1Q14118 895 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 ELOAQ14241 798 aaKnown RBP13.08□□□□□ -0.31
LIMS1-205ENST00000410093 CST6Q15828 149 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 CYP2A13Q16696 494 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 UGT8Q16880 541 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 METRNLQ641Q3 311 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 ABRAXAS1Q6UWZ7 409 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 TMPRSS11BQ86T26 416 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 ZNF547Q8IVP9 402 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 LRRC56Q8IYG6 542 aaPredicted RBP13.08□□□□□ -0.31
LIMS1-205ENST00000410093 ZCCHC7Q8N3Z6 543 aaKnown RBP13.08□□□□□ -0.31
LIMS1-205ENST00000410093 TSPAN14Q8NG11 270 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 CLHC1Q8NHS4 586 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 NCSTNQ92542 709 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 NEIL2Q969S2 332 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 PYURFQ96I23 114 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 VPS50Q96JG6 964 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 MTERF1Q99551 399 aaKnown RBP13.08□□□□□ -0.31
LIMS1-205ENST00000410093 DUSP26Q9BV47 211 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 TRIM8Q9BZR9 551 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 ZDHHC5Q9C0B5 715 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 RAD21L1Q9H4I0 556 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 STON1Q9Y6Q2 735 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 C5orf42Q9H799 3197 aa13.08□□□□□ -0.31
LIMS1-205ENST00000410093 TRIM64A6NGJ6 449 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 K7ESM1 405 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 EI24O14681 340 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 DPM1O60762 260 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 SCN2BO60939 215 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 SEMA3DO95025 777 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 BMP10O95393 424 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 ALBP02768 609 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 TFAP2AP05549 437 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 PCNAP12004 261 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 ARSFP54793 590 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 CDK3Q00526 305 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 SFSWAPQ12872 951 aaKnown RBP13.08□□□□□ -0.32
LIMS1-205ENST00000410093 PON2Q15165 354 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 TEAD4Q15561 434 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 PRAMEF14Q5SWL7 426 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 PRAMEF13Q5VWM6 474 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 TTC23Q5W5X9 447 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 ZNF776Q68DI1 518 aaPredicted RBP13.08□□□□□ -0.32
LIMS1-205ENST00000410093 OR4F3Q6IEY1 312 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 KIAA1161Q6NSJ0 714 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 MTSS1LQ765P7 747 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 C11orf96Q7Z7L8 435 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 HIPK1Q86Z02 1210 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 TRIML2Q8N7C3 387 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 OR5K2Q8NHB8 316 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 GOT1L1Q8NHS2 421 aaPredicted RBP13.08□□□□□ -0.32
LIMS1-205ENST00000410093 ADAMTS16Q8TE57 1224 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 ZFAND2BQ8WV99 257 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 NCLNQ969V3 563 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 RBM4BQ9BQ04 359 aaKnown RBP13.08□□□□□ -0.32
LIMS1-205ENST00000410093 RBM4Q9BWF3 364 aaKnown RBP13.08□□□□□ -0.32
LIMS1-205ENST00000410093 RAB11FIP5Q9BXF6 653 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 YIPF3Q9GZM5 350 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 PIF1Q9H611 641 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 VCX3AQ9NNX9 186 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 DMRT3Q9NQL9 472 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 AASDHPPTQ9NRN7 309 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 PHPT1Q9NRX4 125 aaPredicted RBP13.08□□□□□ -0.32
LIMS1-205ENST00000410093 IFT80Q9P2H3 777 aaPredicted RBP13.08□□□□□ -0.32
LIMS1-205ENST00000410093 FAM8A1Q9UBU6 413 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 SCML1Q9UN30 329 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 VPS4AQ9UN37 437 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 DMTF1Q9Y222 760 aa13.08□□□□□ -0.32
LIMS1-205ENST00000410093 PIPSLA2A3N6 862 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 FAM149AA5PLN7 773 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 TRIM64CA6NLI5 447 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 G3V2T6 193 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 DLGAP1O14490 977 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 PCDH7O60245 1069 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 KDM1AO60341 852 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 CST1P01037 141 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 TTKP33981 857 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 TRIM23P36406 574 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 MAGEA2P43356 314 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 ARHGDIAP52565 204 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 METAP1P53582 386 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 WNT3P56703 355 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 RPS21P63220 83 aaKnown RBP13.07□□□□□ -0.32
LIMS1-205ENST00000410093 MESP2Q0VG99 397 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms