RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 SDE2Q6IQ49 451 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 KIAA1161Q6NSJ0 714 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 PPP4R4Q6NUP7 873 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 GALNT18Q6P9A2 607 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 SLCO4C1Q6ZQN7 724 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 C11orf96Q7Z7L8 435 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 IFNEQ86WN2 208 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 HEATR4Q86WZ0 1026 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 DCUN1D3Q8IWE4 304 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 LAS2Q8IYD9 372 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 LILRA3Q8N6C8 439 aaPredicted RBP7.23□□□□□ -1.25
CXCR4-202ENST00000409817 OR2T12Q8NG77 320 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 OR8J2Q8NGG1 315 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 NKD1Q969G9 470 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 FAM131CQ96AQ9 280 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 MTFMTQ96DP5 389 aaKnown RBP7.23□□□□□ -1.25
CXCR4-202ENST00000409817 CHFRQ96EP1 664 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 C11orf24Q96F05 449 aaPredicted RBP7.23□□□□□ -1.25
CXCR4-202ENST00000409817 APIPQ96GX9 242 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 APOLD1Q96LR9 279 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 GBP5Q96PP8 586 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 OR4K3Q96R72 315 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 PRPF18Q99633 342 aaKnown RBP7.23□□□□□ -1.25
CXCR4-202ENST00000409817 HAUS8Q9BT25 410 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 C9orf16Q9BUW7 83 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 C1QTNF7Q9BXJ2 289 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 TEX101Q9BY14 249 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 UGT2B28Q9BY64 529 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 PLA2G2FQ9BZM2 168 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 PCBD2Q9H0N5 130 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 S1PR5Q9H228 398 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 OR52A5Q9H2C5 316 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 SGK2Q9HBY8 427 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 CCDC177Q9NQR7 707 aaPredicted RBP7.23□□□□□ -1.25
CXCR4-202ENST00000409817 FAM120CQ9NX05 1096 aaKnown RBP7.23□□□□□ -1.25
CXCR4-202ENST00000409817 LMCD1Q9NZU5 365 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 VAPAQ9P0L0 249 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.23□□□□□ -1.25
CXCR4-202ENST00000409817 ADGRE2Q9UHX3 823 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 ACSL5Q9ULC5 683 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 SCML1Q9UN30 329 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 AURKCQ9UQB9 309 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 DLGAP4Q9Y2H0 992 aa7.23□□□□□ -1.25
CXCR4-202ENST00000409817 ELOVL7A1L3X0 281 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 EPOPA6NHQ4 379 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 FAM220BPB1ANY3 271 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 TXNDC9O14530 226 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 KMOO15229 486 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 MID1O15344 667 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 KLF4O43474 513 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 TIPRLO75663 272 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 PCDH8O95206 1070 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 RETP07949 1114 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 ANXA6P08133 673 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 C1GALT1C1LP0DN25 315 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 NPPBP16860 134 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 IL1RNP18510 177 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 SERPINB1P30740 379 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 TRIM23P36406 574 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 RPL3P39023 403 aaKnown RBP7.22□□□□□ -1.25
CXCR4-202ENST00000409817 PIK3CBP42338 1070 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 KIR2DL1P43626 348 aaPredicted RBP7.22□□□□□ -1.25
CXCR4-202ENST00000409817 CHN2P52757 468 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 RPS21P63220 83 aaKnown RBP7.22□□□□□ -1.25
CXCR4-202ENST00000409817 TAP2Q03519 686 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 DMPKQ09013 629 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 ABHD18Q0P651 414 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 STARD3Q14849 445 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 PDK3Q15120 406 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 FAM98BQ52LJ0 330 aaKnown RBP7.22□□□□□ -1.25
CXCR4-202ENST00000409817 TMTC4Q5T4D3 741 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 PARM1Q6UWI2 310 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 LCTLQ6UWM7 567 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 C20orf204Q6ZNR8 217 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 C1orf229Q6ZS94 237 aaPredicted RBP7.22□□□□□ -1.25
CXCR4-202ENST00000409817 ZBTB49Q6ZSB9 765 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 CAMKMTQ7Z624 323 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 TRIM74Q86UV6 250 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 SYT12Q8IV01 421 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 ST13P4Q8IZP2 240 aaPredicted RBP7.22□□□□□ -1.25
CXCR4-202ENST00000409817 RAB42Q8N4Z0 105 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 KRTCAP2Q8N6L1 136 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 MFSD2AQ8NA29 543 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 VPS37AQ8NEZ2 397 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 OR7G3Q8NG95 312 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 SLC5A11Q8WWX8 675 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 NELL1Q92832 810 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 SHDQ96IW2 340 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 ZNF583Q96ND8 569 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 NECTIN4Q96NY8 510 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 GABRG3Q99928 467 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 KXD1Q9BQD3 176 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 BDH2Q9BUT1 245 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 THUMPD3Q9BV44 507 aaKnown RBP7.22□□□□□ -1.25
CXCR4-202ENST00000409817 ZDHHC5Q9C0B5 715 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 NRSN2Q9GZP1 204 aa7.22□□□□□ -1.25
CXCR4-202ENST00000409817 PITHD1Q9GZP4 211 aaPredicted RBP7.22□□□□□ -1.25
CXCR4-202ENST00000409817 KAT8Q9H7Z6 458 aaKnown RBP7.22□□□□□ -1.25
CXCR4-202ENST00000409817 PHPT1Q9NRX4 125 aaPredicted RBP7.22□□□□□ -1.25
CXCR4-202ENST00000409817 SPATA7Q9P0W8 599 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms