RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 GNG14A0A1W2PPG7 69 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 EPN2O95208 641 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 IDSP22304 550 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 SOX9P48436 509 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 MEF2AQ02078 507 aaPredicted RBP19.37■□□□□ 0.69
USP39-204ENST00000409766 LAPTM5Q13571 262 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 THEMIS2Q5TEJ8 643 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 ARMCX6Q7L4S7 300 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 DHRSXQ8N5I4 330 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 TSPAN14Q8NG11 270 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.37■□□□□ 0.69
USP39-204ENST00000409766 RMND5BQ96G75 393 aaPredicted RBP19.37■□□□□ 0.69
USP39-204ENST00000409766 PHF12Q96QT6 1004 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 TRMT61BQ9BVS5 477 aaKnown RBP19.37■□□□□ 0.69
USP39-204ENST00000409766 CAAP1Q9H8G2 361 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 SLC28A3Q9HAS3 691 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 AASDHPPTQ9NRN7 309 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 BTNL2Q9UIR0 455 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 PLAGL1Q9UM63 463 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 EXO1Q9UQ84 846 aaKnown RBP19.37■□□□□ 0.69
USP39-204ENST00000409766 A0A1W2PP55 124 aa19.36■□□□□ 0.69
USP39-204ENST00000409766 CPSF4O95639 269 aaKnown RBP19.36■□□□□ 0.69
USP39-204ENST00000409766 SNAP29O95721 258 aa19.36■□□□□ 0.69
USP39-204ENST00000409766 CST1P01037 141 aa19.36■□□□□ 0.69
USP39-204ENST00000409766 ERGP11308 486 aa19.36■□□□□ 0.69
USP39-204ENST00000409766 HPCAL1P37235 193 aa19.36■□□□□ 0.69
USP39-204ENST00000409766 CAPGP40121 348 aa19.36■□□□□ 0.69
USP39-204ENST00000409766 ARSFP54793 590 aa19.36■□□□□ 0.69
USP39-204ENST00000409766 CNPY1Q3B7I2 92 aa19.36■□□□□ 0.69
USP39-204ENST00000409766 PRAMEF14Q5SWL7 426 aa19.36■□□□□ 0.69
USP39-204ENST00000409766 OTUD3Q5T2D3 398 aaPredicted RBP19.36■□□□□ 0.69
USP39-204ENST00000409766 PRAMEF13Q5VWM6 474 aa19.36■□□□□ 0.69
USP39-204ENST00000409766 LCTLQ6UWM7 567 aa19.36■□□□□ 0.69
USP39-204ENST00000409766 COMMD6Q7Z4G1 85 aa19.36■□□□□ 0.69
USP39-204ENST00000409766 OR5K2Q8NHB8 316 aa19.36■□□□□ 0.69
USP39-204ENST00000409766 CYGBQ8WWM9 190 aa19.36■□□□□ 0.69
USP39-204ENST00000409766 MSRAQ9UJ68 235 aa19.36■□□□□ 0.69
USP39-204ENST00000409766 SUFUQ9UMX1 484 aa19.36■□□□□ 0.69
USP39-204ENST00000409766 ATG2BQ96BY7 2078 aa19.36■□□□□ 0.69
USP39-204ENST00000409766 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.35■□□□□ 0.69
USP39-204ENST00000409766 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.35■□□□□ 0.69
USP39-204ENST00000409766 K7EQS6 105 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 CCNDBP1O95273 360 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 KCNK5O95279 499 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 TGFB1P01137 390 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 TRIM23P36406 574 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 KIR2DL1P43626 348 aaPredicted RBP19.35■□□□□ 0.69
USP39-204ENST00000409766 GALK1P51570 392 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 ALDH3A2P51648 485 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 FGL2Q14314 439 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 NADK2Q4G0N4 442 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 FKBP9P1Q75LS8 142 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 ZNF740Q8NDX6 193 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 FBXL20Q96IG2 436 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 GRIP2Q9C0E4 1043 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 ZFR2Q9UPR6 939 aaKnown RBP19.35■□□□□ 0.69
USP39-204ENST00000409766 TDRKHQ9Y2W6 561 aaKnown RBP19.35■□□□□ 0.69
USP39-204ENST00000409766 TSC22D4Q9Y3Q8 395 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 OR1A2Q9Y585 309 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 PCDHB11Q9Y5F2 797 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 KIF1CO43896 1103 aaKnown RBP19.35■□□□□ 0.69
USP39-204ENST00000409766 OR6B1O95007 311 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 ALPLP05186 524 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 HOXB6P17509 224 aaKnown RBP19.35■□□□□ 0.69
USP39-204ENST00000409766 EFNA1P20827 205 aaPredicted RBP19.35■□□□□ 0.69
USP39-204ENST00000409766 PIK3CBP42338 1070 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 ADARB1P78563 741 aaKnown RBP19.35■□□□□ 0.69
USP39-204ENST00000409766 ZNF763Q0D2J5 394 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 DAG1Q14118 895 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 IRF4Q15306 451 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 CES5AQ6NT32 575 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 ZCCHC8Q6NZY4 707 aaKnown RBP19.35■□□□□ 0.69
USP39-204ENST00000409766 PGBD3Q8N328 593 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 C2orf73Q8N5S3 287 aaPredicted RBP19.35■□□□□ 0.69
USP39-204ENST00000409766 VPS37AQ8NEZ2 397 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 EZH1Q92800 747 aaPredicted RBP19.35■□□□□ 0.69
USP39-204ENST00000409766 CXorf40BQ96DE9 158 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 PYURFQ96I23 114 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 HAUS8Q9BT25 410 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 OR51B5Q9H339 312 aa19.35■□□□□ 0.69
USP39-204ENST00000409766 CLK4Q9HAZ1 481 aaKnown RBP19.35■□□□□ 0.69
USP39-204ENST00000409766 MAGED1Q9Y5V3 778 aaPredicted RBP19.35■□□□□ 0.69
USP39-204ENST00000409766 GPR89AB7ZAQ6 455 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 KMOO15229 486 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 GPR89BP0CG08 455 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 TEAD1P28347 426 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 TIE1P35590 1138 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 TNFRSF4P43489 277 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 NR1H2P55055 460 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 ARHGAP19Q14CB8 494 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 ADRM1Q16186 407 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 ANXA8L1Q5VT79 327 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 CPZQ66K79 652 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 USP51Q70EK9 711 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 STK32CQ86UX6 486 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 FAM129CQ86XR2 697 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 ZDHHC13Q8IUH4 622 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 ZZZ3Q8IYH5 903 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 UBE2E3Q969T4 207 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 WDR26Q9H7D7 661 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms