RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 OTUB2Q96DC9 234 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 PRAP1Q96NZ9 151 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 LENG8Q96PV6 779 aaPredicted RBP8.18□□□□□ -1.1
SCN9A-203ENST00000409672 ANKZF1Q9H8Y5 726 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 PPP4R1LQ9P1A2 415 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 APOBEC3BQ9UH17 382 aaKnown RBP8.18□□□□□ -1.1
SCN9A-203ENST00000409672 FBXO9Q9UK97 447 aaPredicted RBP8.18□□□□□ -1.1
SCN9A-203ENST00000409672 ROBO1Q9Y6N7 1651 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 AHCYL1O43865 530 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 FLYWCH1Q4VC44 716 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 C3orf33Q6P1S2 294 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 RELL1Q8IUW5 271 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 OR8H3Q8N146 312 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 ZFRQ96KR1 1074 aaKnown RBP8.18□□□□□ -1.1
SCN9A-203ENST00000409672 SGCZQ96LD1 299 aa8.18□□□□□ -1.1
SCN9A-203ENST00000409672 PEAK1Q9H792 1746 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 KDM4BO94953 1096 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 ZC3H14Q6PJT7 736 aaKnown RBP8.17□□□□□ -1.1
SCN9A-203ENST00000409672 CEACAM20Q6UY09 585 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 PRR22Q8IZ63 422 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 ZNF781Q8N8C0 355 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 TRPV1Q8NER1 839 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 ASB15Q8WXK1 588 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 PIP5K1AQ99755 562 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 TLR10Q9BXR5 811 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 DEFB126Q9BYW3 111 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 M0R036 132 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 RGS10O43665 173 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 RNGTTO60942 597 aaKnown RBP8.17□□□□□ -1.1
SCN9A-203ENST00000409672 ACTL6BO94805 426 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 HLA-DQB2P05538 268 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 PSMA1P25786 263 aaKnown RBP8.17□□□□□ -1.1
SCN9A-203ENST00000409672 SDC2P34741 201 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 XKP51811 444 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 RGS21Q2M5E4 152 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 ZNF554Q86TJ5 538 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 ZDHHC21Q8IVQ6 265 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 MKL1Q969V6 931 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 CREBZFQ9NS37 354 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 PCDHGC3Q9UN70 934 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 REREQ9P2R6 1566 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 DIP2CQ9Y2E4 1556 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 OR2AT4A6NND4 320 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 H3BML4 177 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 DUX1O43812 170 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 CILPO75339 1184 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 XRCC1P18887 633 aaPredicted RBP8.17□□□□□ -1.1
SCN9A-203ENST00000409672 PPIBP23284 216 aaKnown RBP8.17□□□□□ -1.1
SCN9A-203ENST00000409672 HYAL4Q2M3T9 481 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 SLC13A3Q8WWT9 602 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 NUDT4Q9NZJ9 180 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 WASF3Q9UPY6 502 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 ADH7P40394 386 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 EPHA4P54764 986 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 FXYD6P3P58550 94 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 SLC1A5Q15758 541 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 THOC6Q86W42 341 aaKnown RBP8.17□□□□□ -1.1
SCN9A-203ENST00000409672 OR4N5Q8IXE1 308 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 TOR1AIP2Q8NFQ8 470 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 DIO2Q92813 273 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 CYTH4Q9UIA0 394 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 AGPSO00116 658 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 KAT7O95251 611 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 P04436 131 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 ETV5P41161 510 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 HERV-K104P61576 105 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 MYLK3Q32MK0 819 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 SLC10A6Q3KNW5 377 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 XKRXQ6PP77 449 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 OR10T2Q8NGX3 314 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 FAM3CQ92520 227 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 PELOQ9BRX2 385 aaKnown RBP8.17□□□□□ -1.1
SCN9A-203ENST00000409672 DUSP26Q9BV47 211 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 EHD1Q9H4M9 534 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 IL20RAQ9UHF4 553 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 FZD4Q9ULV1 537 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 PITPNM1O00562 1244 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 UGT2B11O75310 529 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 IFI30P13284 250 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 HOXB8P17481 243 aaPredicted RBP8.17□□□□□ -1.1
SCN9A-203ENST00000409672 ITGB8P26012 769 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 PTX3P26022 381 aaPredicted RBP8.17□□□□□ -1.1
SCN9A-203ENST00000409672 CPOXP36551 454 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 GABRB2P47870 512 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 POGLUT1Q8NBL1 392 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 KBTBD8Q8NFY9 601 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 MED28Q9H204 178 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 CXXC1Q9P0U4 656 aaPredicted RBP8.17□□□□□ -1.1
SCN9A-203ENST00000409672 ATG2BQ96BY7 2078 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 GGT3PA6NGU5 568 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 PPP1R11O60927 126 aaPredicted RBP8.17□□□□□ -1.1
SCN9A-203ENST00000409672 GGT2P36268 569 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 SLC9A3P48764 834 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 DUSP3P51452 185 aaPredicted RBP8.17□□□□□ -1.1
SCN9A-203ENST00000409672 NIPAL4Q0D2K0 466 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 KANK2Q63ZY3 851 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 TMEM214Q6NUQ4 689 aaKnown RBP8.17□□□□□ -1.1
SCN9A-203ENST00000409672 PHF13Q86YI8 300 aaPredicted RBP8.17□□□□□ -1.1
SCN9A-203ENST00000409672 TBC1D21Q8IYX1 336 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 Q9N2J8 555 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms