RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 TRPS1Q9UHF7 1281 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 LOXL2Q9Y4K0 774 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 PCDHGA11Q9Y5H2 935 aa15.84■□□□□ 0.13
TSPAN4-208ENST00000409531 ZFYVE26Q68DK2 2539 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 IGHV5-51A0A0C4DH38 117 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 PMS2P1A4D2B8 440 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 OR2A25A4D2G3 310 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 SLC9B1P1A6NJY1 282 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 CDRT15L2A8MXV6 281 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 KIF1CO43896 1103 aaKnown RBP15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 CRCPO75575 148 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 HGFP14210 728 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 ST6GAL1P15907 406 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 MPSTP25325 297 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 RPS15AP62244 130 aaKnown RBP15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 YBX1P67809 324 aaKnown RBP15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 SH3BP2P78314 561 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 CSNK1G2P78368 415 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 HSD11B2P80365 405 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 GUCY1A3Q02108 690 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 ZC3H12BQ5HYM0 836 aaKnown RBP15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 TMTC4Q5T4D3 741 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 C10orf62Q5T681 223 aaPredicted RBP15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 CUZD1Q86UP6 607 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 PAQR7Q86WK9 346 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 FAM129CQ86XR2 697 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 AFAP1L2Q8N4X5 818 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 RCBTB1Q8NDN9 531 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 TTLQ8NG68 377 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 KLHL6Q8WZ60 621 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 PPM1MQ96MI6 270 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 SLC29A3Q9BZD2 475 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 ILKAPQ9H0C8 392 aaPredicted RBP15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 GEMIN8Q9NWZ8 242 aaKnown RBP15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 SOHLH2Q9NX45 425 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 RAP2CQ9Y3L5 183 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 ZZEF1O43149 2961 aa15.83■□□□□ 0.12
TSPAN4-208ENST00000409531 A0A087WV48 116 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 TRBC2A0A5B9 178 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 AGRPO00253 132 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 PPP6CO00743 305 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 SNNO75324 88 aaPredicted RBP15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 OR4F21O95013 312 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 CHRNGP07510 517 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 PVRP15151 417 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 VARSP26640 1264 aaKnown RBP15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 GSTM2P28161 218 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 CSTF2P33240 577 aaKnown RBP eCLIP15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 EIF2S3P41091 472 aaKnown RBP15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 REEP5Q00765 189 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 SLBPQ14493 270 aaKnown RBP eCLIP15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 TUBB8Q3ZCM7 444 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 FCRL6Q6DN72 434 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 LETMD1Q6P1Q0 360 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 MED27Q6P2C8 311 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 ARHGAP22Q7Z5H3 698 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 SYVN1Q86TM6 617 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 AGBL5Q8NDL9 886 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 THAP11Q96EK4 314 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 SEC16BQ96JE7 1060 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 SLC41A2Q96JW4 573 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 CDK15Q96Q40 435 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 ZFYVE21Q9BQ24 234 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 SARGQ9BW04 601 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 CCDC134Q9H6E4 229 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 NT5DC2Q9H857 520 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 PISDQ9UG56 409 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 ADGRE2Q9UHX3 823 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 SNX6Q9UNH7 406 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 BTRCQ9Y297 605 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 KLHL20Q9Y2M5 609 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 RNF11Q9Y3C5 154 aa15.82■□□□□ 0.12
TSPAN4-208ENST00000409531 A8MU76 341 aa15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 H0YIV9 168 aa15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 UBFD1O14562 309 aaKnown RBP15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 HAT1O14929 419 aa15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 POLR3GO15318 223 aaPredicted RBP15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 RRP8O43159 456 aaKnown RBP15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 ITM2AO43736 263 aa15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 PRAMEF4O60810 478 aa15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 CHEK2O96017 543 aa15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 KRT6AP02538 564 aa15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 KRT6BP04259 564 aa15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 UROSP10746 265 aa15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 NELFEP18615 380 aaKnown RBP15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 ITIH1P19827 911 aa15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 HMOX2P30519 316 aa15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 SERPINB1P30740 379 aa15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 CCR10P46092 362 aa15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 KRT6CP48668 564 aa15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 PCBP4P57723 403 aaKnown RBP15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 PHEXP78562 749 aa15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 OCRLQ01968 901 aa15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 MEF2AQ02078 507 aaPredicted RBP15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 CPSF6Q16630 551 aaKnown RBP eCLIP15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 PRAMEF9Q5VWM5 478 aa15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 CES4AQ5XG92 561 aa15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 TTC19Q6DKK2 380 aaPredicted RBP15.81■□□□□ 0.12
TSPAN4-208ENST00000409531 CYB5D1Q6P9G0 228 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms