RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 MFAP5Q13361 173 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 PWP1Q13610 501 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 CSHL1Q14406 222 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 VWA2Q5GFL6 755 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 COLEC12Q5KU26 742 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 MFSD4BQ5TF39 518 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 ATG9BQ674R7 924 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 IGFL2Q6UWQ7 119 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 CLEC18BQ6UXF7 455 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 SHISA6Q6ZSJ9 500 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 STRA8Q7Z7C7 330 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 ANKMY2Q8IV38 441 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 PARP9Q8IXQ6 854 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 PRSS58Q8IYP2 241 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 ZBED8Q8IZ13 594 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 TCAIMQ8N3R3 496 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 Q8NA96 180 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 MFSD9Q8NBP5 474 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 CLEC18CQ8NCF0 446 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 ABHD11Q8NFV4 315 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 OR56A3Q8NH54 315 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 PYROXD1Q8WU10 500 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 SLC13A3Q8WWT9 602 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 EGFL8Q99944 293 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 AIF1LQ9BQI0 150 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 ERP44Q9BS26 406 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 SARGQ9BW04 601 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 CAPS2Q9BXY5 557 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 TRIM31Q9BZY9 425 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 ATG10Q9H0Y0 220 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 RHOJQ9H4E5 214 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 CNOT10Q9H9A5 744 aaKnown RBP8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 PELI2Q9HAT8 420 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 CLK4Q9HAZ1 481 aaKnown RBP8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 ZNF160Q9HCG1 818 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 GPAMQ9HCL2 828 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 WHRNQ9P202 907 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 ADAMTS6Q9UKP5 1117 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 MKL2Q9ULH7 1088 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 UTP11Q9Y3A2 253 aaKnown RBP8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 COPG1Q9Y678 874 aaKnown RBP8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 SLC22A7Q9Y694 548 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 KCNE2Q9Y6J6 123 aa8.62□□□□□ -1.03
SNORD88A-201ENST00000408314 LOC102723996A0A087X1L8 192 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 A0A088AWK7 358 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 IGHV1-45A0A0A0MS14 117 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 TRBC2A0A5B9 178 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 P2RX6O15547 441 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 NDUFS4O43181 175 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 FOXS1O43638 330 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 ALOX12BO75342 701 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 TSPAN12O95859 305 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 DDAH2O95865 285 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 F7P08709 466 aaPredicted RBP8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 COX6A1P12074 109 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 CDH1P12830 882 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 ZNF10P21506 573 aaPredicted RBP8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 GNLYP22749 145 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 JAK1P23458 1154 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 CASQ1P31415 396 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 AHRP35869 848 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 BCL6P41182 706 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 XCR1P46094 333 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 RPL21P46778 160 aaKnown RBP8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 YBX1P67809 324 aaKnown RBP8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 ARG2P78540 354 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 POU4F1Q01851 419 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 MEF2AQ02078 507 aaPredicted RBP8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 EEF1A2Q05639 463 aaKnown RBP8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 CKAP4Q07065 602 aaKnown RBP8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 ZNF169Q14929 603 aaPredicted RBP8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 PHKG1Q16816 387 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 PLEKHN1Q494U1 663 aaPredicted RBP8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 MINDY4Q4G0A6 757 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 HP1BP3Q5SSJ5 553 aaPredicted RBP8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 TMEM214Q6NUQ4 689 aaKnown RBP8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 TRMT10BQ6PF06 316 aaKnown RBP8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 CEP128Q6ZU80 1094 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 ABHD13Q7L211 337 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 VN1R4Q7Z5H5 301 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 ZC3HC1Q86WB0 502 aaKnown RBP8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 PLD3Q8IV08 490 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 IGDCC3Q8IVU1 814 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 ZC3H7AQ8IWR0 971 aaKnown RBP8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 AMER3Q8N944 861 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 TRPV3Q8NET8 790 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 TTLQ8NG68 377 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 SUN3Q8TAQ9 357 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 DNAJB14Q8TBM8 379 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 SLC5A11Q8WWX8 675 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 SEC16BQ96JE7 1060 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 CNDP1Q96KN2 507 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 OR1F2PQ96R84 312 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 ZNF700Q9H0M5 742 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 LRRC4CQ9HCJ2 640 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 MOCS1Q9NZB8 636 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 LUZP4Q9P127 313 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 ABI3Q9P2A4 366 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 CTNNAL1Q9UBT7 734 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 SNX24Q9Y343 169 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms