RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 ERICH5Q6P6B1 374 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 TMC5Q6UXY8 1006 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 CEP68Q76N32 757 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 PIWIL3Q7Z3Z3 882 aaKnown RBP11.49□□□□□ -0.57
PCNX4-204ENST00000406949 NPAS3Q8IXF0 933 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 SPARTQ8N0X7 666 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 BARD1Q99728 777 aaKnown RBP11.49□□□□□ -0.57
PCNX4-204ENST00000406949 FUNDC2Q9BWH2 189 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 RERGLQ9H628 205 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 SPATA7Q9P0W8 599 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 PSME2Q9UL46 239 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 DUSP12Q9UNI6 340 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 TMEM98Q9Y2Y6 226 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 ANKDD1BA6NHY2 528 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 QSOX1O00391 747 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 ZNF821O75541 412 aaPredicted RBP11.49□□□□□ -0.57
PCNX4-204ENST00000406949 C6orf47O95873 294 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 DNAJA1P31689 397 aaKnown RBP11.49□□□□□ -0.57
PCNX4-204ENST00000406949 SERPINB10P48595 397 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 PTPN5P54829 565 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 TBPL1P62380 186 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 MC1RQ01726 317 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 SP140Q13342 867 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 UGT8Q16880 541 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 CCDC80Q76M96 950 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 STX19Q8N4C7 294 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 RASGEF1AQ8N9B8 481 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 OR7G3Q8NG95 312 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 DNAJB8Q8NHS0 232 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 ZNF420Q8TAQ5 688 aaPredicted RBP11.49□□□□□ -0.57
PCNX4-204ENST00000406949 UBTD2Q8WUN7 234 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 STARD8Q92502 1023 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 NEIL2Q969S2 332 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 GTPBP3Q969Y2 492 aaKnown RBP11.49□□□□□ -0.57
PCNX4-204ENST00000406949 REPS1Q96D71 796 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 PKP4Q99569 1192 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 EXOSC4Q9NPD3 245 aaKnown RBP11.49□□□□□ -0.57
PCNX4-204ENST00000406949 ATAD3AQ9NVI7 634 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 DNAAF2Q9NVR5 837 aaKnown RBP11.49□□□□□ -0.57
PCNX4-204ENST00000406949 ZNF229Q9UJW7 825 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 CCL27Q9Y4X3 112 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 F5P12259 2224 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 CHD5Q8TDI0 1954 aa11.49□□□□□ -0.57
PCNX4-204ENST00000406949 ZNF99A8MXY4 864 aaPredicted RBP11.48□□□□□ -0.57
PCNX4-204ENST00000406949 NRG2O14511 850 aaPredicted RBP11.48□□□□□ -0.57
PCNX4-204ENST00000406949 RGS10O43665 173 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 HPRP00739 348 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 MPC1LP0DKB6 136 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 ETFAP13804 333 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 TRPC1P48995 793 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 PPM1FP49593 454 aaPredicted RBP11.48□□□□□ -0.57
PCNX4-204ENST00000406949 ERVFC1P60507 584 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 PFN3P60673 137 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 VLDLRP98155 873 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 ANXA8L1Q5VT79 327 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 BTN2A2Q8WVV5 523 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 CCDC115Q96NT0 180 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 ARPC5LQ9BPX5 153 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 SLC35A5Q9BS91 424 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 TMEM45AQ9NWC5 275 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 FAM120CQ9NX05 1096 aaKnown RBP11.48□□□□□ -0.57
PCNX4-204ENST00000406949 TRPC4Q9UBN4 977 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 FADS2P1A8MWK0 482 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 AREL1O15033 823 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 TIMP2P16035 220 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 GPC1P35052 558 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 TAS2R50P59544 299 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 VBP1P61758 197 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 CTU2Q2VPK5 515 aaKnown RBP11.48□□□□□ -0.57
PCNX4-204ENST00000406949 ZNF805Q5CZA5 627 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 LIPJQ5W064 366 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 TNFAIP8L2Q6P589 184 aaPredicted RBP11.48□□□□□ -0.57
PCNX4-204ENST00000406949 C12orf76Q8N812 135 aaPredicted RBP11.48□□□□□ -0.57
PCNX4-204ENST00000406949 POF1BQ8WVV4 589 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 DACH2Q96NX9 599 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 C6orf62Q9GZU0 229 aaPredicted RBP11.48□□□□□ -0.57
PCNX4-204ENST00000406949 TRIM39Q9HCM9 518 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 DNMT3BQ9UBC3 853 aaKnown RBP11.48□□□□□ -0.57
PCNX4-204ENST00000406949 CASP8AP2Q9UKL3 1982 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 SCN5AQ14524 2016 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 TMEM247A6NEH6 219 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 VIPP01282 170 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 FPR1P21462 350 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 VIPR2P41587 438 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 PRKAG1P54619 331 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 CSTF3Q12996 717 aaKnown RBP11.48□□□□□ -0.57
PCNX4-204ENST00000406949 TP53BP2Q13625 1128 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 MMAAQ8IVH4 418 aaKnown RBP11.48□□□□□ -0.57
PCNX4-204ENST00000406949 REM2Q8IYK8 340 aaPredicted RBP11.48□□□□□ -0.57
PCNX4-204ENST00000406949 NFKBIDQ8NI38 313 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 UBE2FQ969M7 185 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 PLEKHA8Q96JA3 519 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 HHIPL1Q96JK4 782 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 CERS4Q9HA82 394 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 TM9SF3Q9HD45 589 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 RHCGQ9UBD6 479 aa11.48□□□□□ -0.57
PCNX4-204ENST00000406949 GABRR3A8MPY1 467 aa11.47□□□□□ -0.57
PCNX4-204ENST00000406949 M0QX08 132 aa11.47□□□□□ -0.57
PCNX4-204ENST00000406949 UPK1AO00322 258 aa11.47□□□□□ -0.57
PCNX4-204ENST00000406949 GREM1O60565 184 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms