RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 PIGXQ8TBF5 258 aa4.59□□□□□ -1.67
PCDH11X-207ENST00000406881 MAPK15Q8TD08 544 aa4.59□□□□□ -1.67
PCDH11X-207ENST00000406881 NACC2Q96BF6 587 aa4.59□□□□□ -1.67
PCDH11X-207ENST00000406881 DTD2Q96FN9 168 aa4.59□□□□□ -1.67
PCDH11X-207ENST00000406881 RBM18Q96H35 190 aaKnown RBP4.59□□□□□ -1.67
PCDH11X-207ENST00000406881 ZFYVE19Q96K21 471 aa4.59□□□□□ -1.67
PCDH11X-207ENST00000406881 KXD1Q9BQD3 176 aa4.59□□□□□ -1.67
PCDH11X-207ENST00000406881 BOCQ9BWV1 1114 aa4.59□□□□□ -1.67
PCDH11X-207ENST00000406881 PAIP1Q9H074 479 aaKnown RBP4.59□□□□□ -1.67
PCDH11X-207ENST00000406881 NKX2-4Q9H2Z4 354 aa4.59□□□□□ -1.67
PCDH11X-207ENST00000406881 PELI2Q9HAT8 420 aa4.59□□□□□ -1.67
PCDH11X-207ENST00000406881 TM9SF3Q9HD45 589 aa4.59□□□□□ -1.67
PCDH11X-207ENST00000406881 MS4A12Q9NXJ0 267 aa4.59□□□□□ -1.67
PCDH11X-207ENST00000406881 TUBA8Q9NY65 449 aaPredicted RBP4.59□□□□□ -1.67
PCDH11X-207ENST00000406881 GPR34Q9UPC5 381 aa4.59□□□□□ -1.67
PCDH11X-207ENST00000406881 TSC22D4Q9Y3Q8 395 aa4.59□□□□□ -1.67
PCDH11X-207ENST00000406881 AP1M2Q9Y6Q5 423 aa4.59□□□□□ -1.67
PCDH11X-207ENST00000406881 U3KQV3 271 aa4.59□□□□□ -1.67
PCDH11X-207ENST00000406881 A0A1W2PQU0 124 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 HTRA2O43464 458 aaPredicted RBP4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 HPRP00739 348 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 CYP17A1P05093 508 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 ALPPP05187 535 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 DRD1P21728 446 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 UQCRC2P22695 453 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 GABRB3P28472 473 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 PCYT1AP49585 367 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 CCR4P51679 360 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 NCBP2P52298 156 aaKnown RBP eCLIP4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 PSMD4P55036 377 aaKnown RBP4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 CDH12P55289 794 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 TAS2R50P59544 299 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 TUBA4AP68366 448 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 CREB5Q02930 508 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 ZNF155Q12901 538 aaPredicted RBP4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 ARHGAP19Q14CB8 494 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 ATP6AP1Q15904 470 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 PIGGQ5H8A4 983 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 RABL3Q5HYI8 236 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 LIPIQ6XZB0 460 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 GAREM2Q75VX8 874 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 TICAM1Q8IUC6 712 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 TMEM145Q8NBT3 493 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 OR52B6Q8NGF0 335 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 C9orf43Q8TAL5 461 aaPredicted RBP4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 SPPL3Q8TCT6 385 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 SORCS1Q8WY21 1168 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 NODALQ96S42 347 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 SLC39A3Q9BRY0 314 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 BHLHE41Q9C0J9 482 aaPredicted RBP4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 SLITRK2Q9H156 845 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 BRF2Q9HAW0 419 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 HCFC1R1Q9NWW0 138 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 DNMT3BQ9UBC3 853 aaKnown RBP4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 GIMAP2Q9UG22 337 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 KCNK6Q9Y257 313 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 ACTL7AQ9Y615 435 aa4.59□□□□□ -1.68
PCDH11X-207ENST00000406881 A0A1W2PP55 124 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 LRRC14BA6NHZ5 514 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 ARNTLO00327 626 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 MUSKO15146 869 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 NDUFS4O43181 175 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 COQ9O75208 318 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 TRMUO75648 421 aaKnown RBP4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 UBXN7O94888 489 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 NUDT14O95848 222 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 PAK4O96013 591 aaPredicted RBP4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 C9P02748 559 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 ALOX5P09917 674 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 DRD2P14416 443 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 GNSP15586 552 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 CKMT2P17540 419 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 GSTM3P21266 225 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 HLA-FP30511 346 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 ALDH3A2P51648 485 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 TBPL1P62380 186 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 MVKQ03426 396 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 MTAPQ13126 283 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 CBLBQ13191 982 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 BIKQ13323 160 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 CCNIQ14094 377 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 SIM2Q14190 667 aaPredicted RBP4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 UBXN2BQ14CS0 331 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 ABRAXAS2Q15018 415 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 ZNF423Q2M1K9 1284 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 ZNF311Q5JNZ3 666 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 TOR1AIP1Q5JTV8 583 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 GPR107Q5VW38 600 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 LARP4Q71RC2 724 aaKnown RBP eCLIP4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 TMEM173Q86WV6 379 aaPredicted RBP4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 GKN2Q86XP6 184 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 VANGL1Q8TAA9 524 aaPredicted RBP4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 FAM81AQ8TBF8 368 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 SLC9A6Q92581 669 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 KLHDC7BQ96G42 594 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 AURKBQ96GD4 344 aaPredicted RBP4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 WDR83Q9BRX9 315 aaKnown RBP4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 NUAK2Q9H093 628 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 OR51B5Q9H339 312 aa4.58□□□□□ -1.68
PCDH11X-207ENST00000406881 MAGIXQ9H6Y5 334 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms