RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 MAT1AQ00266 395 aaKnown RBP18.34■□□□□ 0.53
HDAC11-205ENST00000404548 ZNF33BQ06732 778 aa18.34■□□□□ 0.53
HDAC11-205ENST00000404548 DHX34Q14147 1143 aaKnown RBP18.34■□□□□ 0.53
HDAC11-205ENST00000404548 THEMIS2Q5TEJ8 643 aa18.34■□□□□ 0.53
HDAC11-205ENST00000404548 LRRC8EQ6NSJ5 796 aa18.34■□□□□ 0.53
HDAC11-205ENST00000404548 TMEM214Q6NUQ4 689 aaKnown RBP18.34■□□□□ 0.53
HDAC11-205ENST00000404548 CASC4Q6P4E1 433 aa18.34■□□□□ 0.53
HDAC11-205ENST00000404548 CYHR1Q6ZMK1 362 aa18.34■□□□□ 0.53
HDAC11-205ENST00000404548 VN1R4Q7Z5H5 301 aa18.34■□□□□ 0.53
HDAC11-205ENST00000404548 CPEB2Q7Z5Q1 589 aaKnown RBP18.34■□□□□ 0.53
HDAC11-205ENST00000404548 MCEMP1Q8IX19 187 aa18.34■□□□□ 0.53
HDAC11-205ENST00000404548 OR9A4Q8NGU2 314 aa18.34■□□□□ 0.53
HDAC11-205ENST00000404548 CYTH2Q99418 400 aa18.34■□□□□ 0.53
HDAC11-205ENST00000404548 XAB2Q9HCS7 855 aaKnown RBP18.34■□□□□ 0.53
HDAC11-205ENST00000404548 CCDC177Q9NQR7 707 aaPredicted RBP18.34■□□□□ 0.53
HDAC11-205ENST00000404548 AKAP9Q99996 3911 aa18.34■□□□□ 0.53
HDAC11-205ENST00000404548 TRGV8A0A0C4DH27 118 aa18.33■□□□□ 0.52
HDAC11-205ENST00000404548 ZCWPW2A0A1B0GU75 182 aa18.33■□□□□ 0.52
HDAC11-205ENST00000404548 CTAGE9A4FU28 777 aa18.33■□□□□ 0.52
HDAC11-205ENST00000404548 GOLGA6L6A8MZA4 724 aa18.33■□□□□ 0.52
HDAC11-205ENST00000404548 H7BY64 318 aa18.33■□□□□ 0.52
HDAC11-205ENST00000404548 THOC5Q13769 683 aaKnown RBP18.33■□□□□ 0.52
HDAC11-205ENST00000404548 ZNF549Q6P9A3 640 aa18.33■□□□□ 0.52
HDAC11-205ENST00000404548 MCUQ8NE86 351 aa18.33■□□□□ 0.52
HDAC11-205ENST00000404548 TRIM58Q8NG06 486 aa18.33■□□□□ 0.52
HDAC11-205ENST00000404548 CD200R1Q8TD46 325 aa18.33■□□□□ 0.52
HDAC11-205ENST00000404548 ZNF354BQ96LW1 612 aa18.33■□□□□ 0.52
HDAC11-205ENST00000404548 PRAP1Q96NZ9 151 aa18.33■□□□□ 0.52
HDAC11-205ENST00000404548 SDR42E2A6NKP2 422 aa18.32■□□□□ 0.52
HDAC11-205ENST00000404548 SYF2O95926 243 aaKnown RBP18.32■□□□□ 0.52
HDAC11-205ENST00000404548 F10P00742 488 aa18.32■□□□□ 0.52
HDAC11-205ENST00000404548 AGAP20933 346 aa18.32■□□□□ 0.52
HDAC11-205ENST00000404548 IL10P22301 178 aa18.32■□□□□ 0.52
HDAC11-205ENST00000404548 BCL6P41182 706 aa18.32■□□□□ 0.52
HDAC11-205ENST00000404548 TBPL1P62380 186 aa18.32■□□□□ 0.52
HDAC11-205ENST00000404548 GPS1Q13098 491 aa18.32■□□□□ 0.52
HDAC11-205ENST00000404548 CUL1Q13616 776 aa18.32■□□□□ 0.52
HDAC11-205ENST00000404548 EXT1Q16394 746 aa18.32■□□□□ 0.52
HDAC11-205ENST00000404548 ZNF630Q2M218 657 aaPredicted RBP18.32■□□□□ 0.52
HDAC11-205ENST00000404548 ZNF766Q5HY98 468 aa18.32■□□□□ 0.52
HDAC11-205ENST00000404548 ACER2Q5QJU3 275 aa18.32■□□□□ 0.52
HDAC11-205ENST00000404548 UBE2R2Q712K3 238 aaPredicted RBP18.32■□□□□ 0.52
HDAC11-205ENST00000404548 MRGPRGQ86SM5 289 aa18.32■□□□□ 0.52
HDAC11-205ENST00000404548 PLD3Q8IV08 490 aa18.32■□□□□ 0.52
HDAC11-205ENST00000404548 DENND6AQ8IWF6 608 aa18.32■□□□□ 0.52
HDAC11-205ENST00000404548 SPC24Q8NBT2 197 aa18.32■□□□□ 0.52
HDAC11-205ENST00000404548 CAMKVQ8NCB2 501 aa18.32■□□□□ 0.52
HDAC11-205ENST00000404548 OR51Q1Q8NH59 317 aa18.32■□□□□ 0.52
HDAC11-205ENST00000404548 CALML6Q8TD86 181 aa18.32■□□□□ 0.52
HDAC11-205ENST00000404548 THAP3Q8WTV1 239 aaPredicted RBP18.32■□□□□ 0.52
HDAC11-205ENST00000404548 ZNF669Q96BR6 464 aaPredicted RBP18.32■□□□□ 0.52
HDAC11-205ENST00000404548 TM4SF19Q96DZ7 209 aa18.32■□□□□ 0.52
HDAC11-205ENST00000404548 CCL21O00585 134 aa18.31■□□□□ 0.52
HDAC11-205ENST00000404548 SEC24DO94855 1032 aaPredicted RBP18.31■□□□□ 0.52
HDAC11-205ENST00000404548 MLYCDO95822 493 aa18.31■□□□□ 0.52
HDAC11-205ENST00000404548 CCND1P24385 295 aa18.31■□□□□ 0.52
HDAC11-205ENST00000404548 SLC1A2P43004 574 aa18.31■□□□□ 0.52
HDAC11-205ENST00000404548 MAGEA3P43357 314 aa18.31■□□□□ 0.52
HDAC11-205ENST00000404548 XCR1P46094 333 aa18.31■□□□□ 0.52
HDAC11-205ENST00000404548 CASP6P55212 293 aa18.31■□□□□ 0.52
HDAC11-205ENST00000404548 SNRPNP63162 240 aaKnown RBP18.31■□□□□ 0.52
HDAC11-205ENST00000404548 BTBD16Q32M84 506 aa18.31■□□□□ 0.52
HDAC11-205ENST00000404548 MINDY4Q4G0A6 757 aa18.31■□□□□ 0.52
HDAC11-205ENST00000404548 ANKRD22Q5VYY1 191 aa18.31■□□□□ 0.52
HDAC11-205ENST00000404548 XKRXQ6PP77 449 aa18.31■□□□□ 0.52
HDAC11-205ENST00000404548 LANCL3Q6ZV70 420 aa18.31■□□□□ 0.52
HDAC11-205ENST00000404548 GAS2L3Q86XJ1 694 aa18.31■□□□□ 0.52
HDAC11-205ENST00000404548 LGI4Q8N135 537 aa18.31■□□□□ 0.52
HDAC11-205ENST00000404548 MDS2Q8NDY4 140 aa18.31■□□□□ 0.52
HDAC11-205ENST00000404548 M1APQ8TC57 530 aa18.31■□□□□ 0.52
HDAC11-205ENST00000404548 CCDC138Q96M89 665 aa18.31■□□□□ 0.52
HDAC11-205ENST00000404548 SERPINB12Q96P63 405 aa18.31■□□□□ 0.52
HDAC11-205ENST00000404548 GPR21Q99679 349 aa18.31■□□□□ 0.52
HDAC11-205ENST00000404548 MMP25Q9NPA2 562 aa18.31■□□□□ 0.52
HDAC11-205ENST00000404548 FBXO6Q9NRD1 293 aaPredicted RBP18.31■□□□□ 0.52
HDAC11-205ENST00000404548 SLC22A7Q9Y694 548 aa18.31■□□□□ 0.52
HDAC11-205ENST00000404548 POLQO75417 2590 aa18.31■□□□□ 0.52
HDAC11-205ENST00000404548 CEP104O60308 925 aa18.3■□□□□ 0.52
HDAC11-205ENST00000404548 SLC19A2O60779 497 aa18.3■□□□□ 0.52
HDAC11-205ENST00000404548 CSNK1G2P78368 415 aa18.3■□□□□ 0.52
HDAC11-205ENST00000404548 SP140Q13342 867 aa18.3■□□□□ 0.52
HDAC11-205ENST00000404548 CTBP1Q13363 440 aa18.3■□□□□ 0.52
HDAC11-205ENST00000404548 TRIP13Q15645 432 aaPredicted RBP18.3■□□□□ 0.52
HDAC11-205ENST00000404548 KRTCAP3Q53RY4 240 aa18.3■□□□□ 0.52
HDAC11-205ENST00000404548 PRSS41Q7RTY9 318 aa18.3■□□□□ 0.52
HDAC11-205ENST00000404548 PIWIL4Q7Z3Z4 852 aaKnown RBP18.3■□□□□ 0.52
HDAC11-205ENST00000404548 GDF7Q7Z4P5 450 aa18.3■□□□□ 0.52
HDAC11-205ENST00000404548 ANKRD37Q7Z713 158 aa18.3■□□□□ 0.52
HDAC11-205ENST00000404548 BEST3Q8N1M1 668 aa18.3■□□□□ 0.52
HDAC11-205ENST00000404548 OR1F2PQ96R84 312 aa18.3■□□□□ 0.52
HDAC11-205ENST00000404548 ANKHQ9HCJ1 492 aa18.3■□□□□ 0.52
HDAC11-205ENST00000404548 PKDREJQ9NTG1 2253 aa18.3■□□□□ 0.52
HDAC11-205ENST00000404548 SCN2AQ99250 2005 aa18.3■□□□□ 0.52
HDAC11-205ENST00000404548 ASPDHA6ND91 283 aa18.29■□□□□ 0.52
HDAC11-205ENST00000404548 C8GP07360 202 aa18.29■□□□□ 0.52
HDAC11-205ENST00000404548 CCDC175P0C221 793 aa18.29■□□□□ 0.52
HDAC11-205ENST00000404548 IL1RNP18510 177 aa18.29■□□□□ 0.52
HDAC11-205ENST00000404548 HTR1EP28566 365 aa18.29■□□□□ 0.52
HDAC11-205ENST00000404548 GRNP28799 593 aaKnown RBP18.29■□□□□ 0.52
HDAC11-205ENST00000404548 TUBA3CQ13748 450 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms