RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 PPT2Q9UMR5 302 aa20.2■□□□□ 0.82
TPM1-208ENST00000404484 PCM1Q15154 2024 aa20.19■□□□□ 0.82
TPM1-208ENST00000404484 AIM2O14862 343 aa20.19■□□□□ 0.82
TPM1-208ENST00000404484 VILLO15195 856 aa20.19■□□□□ 0.82
TPM1-208ENST00000404484 HRH2P25021 359 aa20.19■□□□□ 0.82
TPM1-208ENST00000404484 PGM1P36871 562 aa20.19■□□□□ 0.82
TPM1-208ENST00000404484 KCNK10P57789 538 aa20.19■□□□□ 0.82
TPM1-208ENST00000404484 NXPH1P58417 271 aa20.19■□□□□ 0.82
TPM1-208ENST00000404484 TEAD4Q15561 434 aa20.19■□□□□ 0.82
TPM1-208ENST00000404484 COQ5Q5HYK3 327 aa20.19■□□□□ 0.82
TPM1-208ENST00000404484 FAM129CQ86XR2 697 aa20.19■□□□□ 0.82
TPM1-208ENST00000404484 SDR16C5Q8N3Y7 309 aa20.19■□□□□ 0.82
TPM1-208ENST00000404484 PCYOX1LQ8NBM8 494 aa20.19■□□□□ 0.82
TPM1-208ENST00000404484 OR9I1Q8NGQ6 314 aa20.19■□□□□ 0.82
TPM1-208ENST00000404484 MTERF1Q99551 399 aaKnown RBP20.19■□□□□ 0.82
TPM1-208ENST00000404484 LRRC61Q9BV99 259 aa20.19■□□□□ 0.82
TPM1-208ENST00000404484 SRMSQ9H3Y6 488 aa20.19■□□□□ 0.82
TPM1-208ENST00000404484 NDUFAF1Q9Y375 327 aa20.19■□□□□ 0.82
TPM1-208ENST00000404484 FAM234BA2RU67 622 aa20.18■□□□□ 0.82
TPM1-208ENST00000404484 FAM221BA6H8Z2 402 aa20.18■□□□□ 0.82
TPM1-208ENST00000404484 NR5A2O00482 541 aa20.18■□□□□ 0.82
TPM1-208ENST00000404484 NRP2O60462 931 aa20.18■□□□□ 0.82
TPM1-208ENST00000404484 MYO1DO94832 1006 aa20.18■□□□□ 0.82
TPM1-208ENST00000404484 G6PDP11413 515 aa20.18■□□□□ 0.82
TPM1-208ENST00000404484 JAK1P23458 1154 aa20.18■□□□□ 0.82
TPM1-208ENST00000404484 NME5P56597 212 aa20.18■□□□□ 0.82
TPM1-208ENST00000404484 C21orf59P57076 290 aa20.18■□□□□ 0.82
TPM1-208ENST00000404484 REEP5Q00765 189 aa20.18■□□□□ 0.82
TPM1-208ENST00000404484 RCAN2Q14206 197 aa20.18■□□□□ 0.82
TPM1-208ENST00000404484 KIAA0040Q15053 153 aa20.18■□□□□ 0.82
TPM1-208ENST00000404484 PLCL1Q15111 1095 aa20.18■□□□□ 0.82
TPM1-208ENST00000404484 BLOC1S3Q6QNY0 202 aa20.18■□□□□ 0.82
TPM1-208ENST00000404484 GKN2Q86XP6 184 aa20.18■□□□□ 0.82
TPM1-208ENST00000404484 FUNDC1Q8IVP5 155 aa20.18■□□□□ 0.82
TPM1-208ENST00000404484 OR4K1Q8NGD4 311 aa20.18■□□□□ 0.82
TPM1-208ENST00000404484 OR2A1Q8NGT9 310 aa20.18■□□□□ 0.82
TPM1-208ENST00000404484 FBXO27Q8NI29 283 aa20.18■□□□□ 0.82
TPM1-208ENST00000404484 SLC40A1Q9NP59 571 aa20.18■□□□□ 0.82
TPM1-208ENST00000404484 CPNE7Q9UBL6 633 aa20.18■□□□□ 0.82
TPM1-208ENST00000404484 SPASTQ9UBP0 616 aa20.18■□□□□ 0.82
TPM1-208ENST00000404484 SNX11Q9Y5W9 270 aa20.18■□□□□ 0.82
TPM1-208ENST00000404484 MAGEB17A8MXT2 336 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 ANGPT2O15123 496 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 ITGAXP20702 1163 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 CMPK1P30085 196 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 HNRNPKP61978 463 aaKnown RBP eCLIP20.17■□□□□ 0.82
TPM1-208ENST00000404484 UBE2IP63279 158 aaKnown RBP20.17■□□□□ 0.82
TPM1-208ENST00000404484 SLC25A3Q00325 362 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 ACSM2AQ08AH3 577 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 HLA-BQ31612 363 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 SPIN4Q56A73 249 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 ACSM2BQ68CK6 577 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 REP15Q6BDI9 236 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 SLC9B2Q86UD5 537 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 TBC1D19Q8N5T2 526 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 GLB1L3Q8NCI6 653 aaPredicted RBP20.17■□□□□ 0.82
TPM1-208ENST00000404484 SPDL1Q96EA4 605 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 FCRL1Q96LA6 429 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 SERPINI1Q99574 410 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 IL21RQ9HBE5 538 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 MRPS30Q9NP92 439 aaKnown RBP20.17■□□□□ 0.82
TPM1-208ENST00000404484 DMRT3Q9NQL9 472 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 DNAAF2Q9NVR5 837 aaKnown RBP20.17■□□□□ 0.82
TPM1-208ENST00000404484 RUVBL1Q9Y265 456 aaKnown RBP20.17■□□□□ 0.82
TPM1-208ENST00000404484 PCNX2A6NKB5 2137 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 CACNA1AO00555 2505 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 PRICKLE3O43900 615 aaPredicted RBP20.17■□□□□ 0.82
TPM1-208ENST00000404484 CHRM5P08912 532 aaPredicted RBP20.17■□□□□ 0.82
TPM1-208ENST00000404484 AMD1P17707 334 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 PSMB5P28074 263 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 GRK3P35626 688 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 POLR2JP52435 117 aaKnown RBP20.17■□□□□ 0.82
TPM1-208ENST00000404484 UFM1P61960 85 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 HACD2Q6Y1H2 254 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 DSELQ8IZU8 1212 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 LIX1Q8N485 282 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 FAM46DQ8NEK8 389 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 TTLQ8NG68 377 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 OR4E2Q8NGC2 313 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 ZDHHC1Q8WTX9 485 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 UTP4Q969X6 686 aaKnown RBP20.17■□□□□ 0.82
TPM1-208ENST00000404484 DPY30Q9C005 99 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 RHBGQ9H310 441 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 GAREM1Q9H706 876 aa20.17■□□□□ 0.82
TPM1-208ENST00000404484 PRPF19Q9UMS4 504 aaKnown RBP20.17■□□□□ 0.82
TPM1-208ENST00000404484 TRBV23OR9-2A0A075B6M9 112 aa20.16■□□□□ 0.82
TPM1-208ENST00000404484 PRAMEF33A0A0G2JMD5 474 aa20.16■□□□□ 0.82
TPM1-208ENST00000404484 MRASO14807 208 aa20.16■□□□□ 0.82
TPM1-208ENST00000404484 BCKDHAP12694 445 aa20.16■□□□□ 0.82
TPM1-208ENST00000404484 GSTM2P28161 218 aa20.16■□□□□ 0.82
TPM1-208ENST00000404484 CLNS1AP54105 237 aaKnown RBP20.16■□□□□ 0.82
TPM1-208ENST00000404484 RPS13P62277 151 aaKnown RBP20.16■□□□□ 0.82
TPM1-208ENST00000404484 KIR2DS3Q14952 304 aa20.16■□□□□ 0.82
TPM1-208ENST00000404484 RBBP5Q15291 538 aaKnown RBP20.16■□□□□ 0.82
TPM1-208ENST00000404484 SF1Q15637 639 aaKnown RBP20.16■□□□□ 0.82
TPM1-208ENST00000404484 DGLUCYQ7Z3D6 616 aa20.16■□□□□ 0.82
TPM1-208ENST00000404484 PGAM4Q8N0Y7 254 aa20.16■□□□□ 0.82
TPM1-208ENST00000404484 PROKR1Q8TCW9 393 aa20.16■□□□□ 0.82
TPM1-208ENST00000404484 SLC37A2Q8TED4 501 aa20.16■□□□□ 0.82
TPM1-208ENST00000404484 ROPN1LQ96C74 230 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms