RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 ABHD18Q0P651 414 aa14.17□□□□□ -0.14
RPRD1A-202ENST00000399022 GRSF1Q12849 480 aaKnown RBP eCLIP14.17□□□□□ -0.14
RPRD1A-202ENST00000399022 GPR17Q13304 367 aa14.17□□□□□ -0.14
RPRD1A-202ENST00000399022 BCL7AQ4VC05 210 aa14.17□□□□□ -0.14
RPRD1A-202ENST00000399022 BCL7BQ9BQE9 202 aa14.17□□□□□ -0.14
RPRD1A-202ENST00000399022 ZCCHC2Q9C0B9 1178 aaKnown RBP14.17□□□□□ -0.14
RPRD1A-202ENST00000399022 SDR39U1Q9NRG7 319 aaPredicted RBP14.17□□□□□ -0.14
RPRD1A-202ENST00000399022 CMAHPQ9Y471 501 aa14.17□□□□□ -0.14
RPRD1A-202ENST00000399022 ACTL7AQ9Y615 435 aa14.17□□□□□ -0.14
RPRD1A-202ENST00000399022 MYO7AQ13402 2215 aa14.17□□□□□ -0.14
RPRD1A-202ENST00000399022 SDK1Q7Z5N4 2213 aa14.17□□□□□ -0.14
RPRD1A-202ENST00000399022 SULT1C4O75897 302 aa14.17□□□□□ -0.14
RPRD1A-202ENST00000399022 SEMA3AQ14563 771 aa14.17□□□□□ -0.14
RPRD1A-202ENST00000399022 NDUFAF6Q330K2 333 aa14.17□□□□□ -0.14
RPRD1A-202ENST00000399022 CES4AQ5XG92 561 aa14.17□□□□□ -0.14
RPRD1A-202ENST00000399022 ASB12Q8WXK4 309 aa14.17□□□□□ -0.14
RPRD1A-202ENST00000399022 CAPNS2Q96L46 248 aa14.17□□□□□ -0.14
RPRD1A-202ENST00000399022 FNDC11Q9BVV2 318 aa14.17□□□□□ -0.14
RPRD1A-202ENST00000399022 KLHL28Q9NXS3 571 aa14.17□□□□□ -0.14
RPRD1A-202ENST00000399022 MAP4K5Q9Y4K4 846 aa14.17□□□□□ -0.14
RPRD1A-202ENST00000399022 ADAMTSL1Q8N6G6 1762 aa14.17□□□□□ -0.14
RPRD1A-202ENST00000399022 ISM1B1AKI9 464 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 PPP6CO00743 305 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 PRAMEF11O60813 436 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 SEC14L2O76054 403 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 ADH1AP07327 375 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 PRPS2P11908 318 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 CDKN2DP55273 166 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 PLPP4Q5VZY2 271 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 LSMEM2Q8N112 164 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 ANKRD49Q8WVL7 239 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 CCDC120Q96HB5 630 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 ERMAPQ96PL5 475 aaPredicted RBP14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 TEFMQ96QE5 360 aaKnown RBP14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 ABCG2Q9UNQ0 655 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 NCKAP1Q9Y2A7 1128 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 DNMT3AQ9Y6K1 912 aaPredicted RBP14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 RREB1Q92766 1687 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 AP3D1O14617 1153 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 AOC2O75106 756 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 CKMT1AP12532 417 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 HOXD11P31277 338 aaPredicted RBP14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 GPR1P46091 355 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 DEFA5Q01523 94 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 HNRNPA0Q13151 305 aaKnown RBP14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 INAVAQ3KP66 663 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 MPPE1Q53F39 396 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 KIAA0319Q5VV43 1072 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 XKRXQ6PP77 449 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 PRSS48Q7RTY5 328 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 UBE2Q1Q7Z7E8 422 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 RBM23Q86U06 439 aaKnown RBP14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 GHDCQ8N2G8 530 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 PPIL3Q9H2H8 161 aaKnown RBP14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 USP22Q9UPT9 525 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 MRPS23Q9Y3D9 190 aaKnown RBP14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 KCNE2Q9Y6J6 123 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 IFNGR2P38484 337 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 MAP2K3P46734 347 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 ANXA11P50995 505 aaKnown RBP14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 FOXA1P55317 472 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 AP1S1P61966 158 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 ATAD3CQ5T2N8 411 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 PM20D1Q6GTS8 502 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 LARP4Q71RC2 724 aaKnown RBP eCLIP14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 ADGRD2Q7Z7M1 963 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 UMODL1-AS1Q8N2C9 162 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 CELF2-AS1Q8N7Q2 184 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 KIAA1191Q96A73 305 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 ABCB8Q9NUT2 735 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 MS4A12Q9NXJ0 267 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 YIPF1Q9Y548 306 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 A0A0U1RQS6 177 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 SMIM11AP58511 58 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 NPRL3Q12980 569 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 ANXA8L1Q5VT79 327 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 SPRED1Q7Z699 444 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 SCD5Q86SK9 330 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 ZNF614Q8N883 585 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 TEX47Q8TBZ9 253 aa14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 NSUN3Q9H649 340 aaKnown RBP14.16□□□□□ -0.14
RPRD1A-202ENST00000399022 A0A1W2PRU2 124 aa14.15□□□□□ -0.14
RPRD1A-202ENST00000399022 TLL1O43897 1013 aa14.15□□□□□ -0.14
RPRD1A-202ENST00000399022 CLDN7O95471 211 aa14.15□□□□□ -0.14
RPRD1A-202ENST00000399022 S1PR4O95977 384 aa14.15□□□□□ -0.14
RPRD1A-202ENST00000399022 ELFN1P0C7U0 828 aa14.15□□□□□ -0.14
RPRD1A-202ENST00000399022 ARRB2P32121 409 aa14.15□□□□□ -0.14
RPRD1A-202ENST00000399022 IDNKQ5T6J7 187 aa14.15□□□□□ -0.14
RPRD1A-202ENST00000399022 LYPLAL1Q5VWZ2 237 aa14.15□□□□□ -0.14
RPRD1A-202ENST00000399022 RANBP10Q6VN20 620 aa14.15□□□□□ -0.14
RPRD1A-202ENST00000399022 GALNT10Q86SR1 603 aa14.15□□□□□ -0.14
RPRD1A-202ENST00000399022 FAM217AQ8IXS0 508 aa14.15□□□□□ -0.14
RPRD1A-202ENST00000399022 PIGKQ92643 395 aa14.15□□□□□ -0.14
RPRD1A-202ENST00000399022 PLD4Q96BZ4 506 aa14.15□□□□□ -0.14
RPRD1A-202ENST00000399022 GTPBP2Q9BX10 602 aaKnown RBP14.15□□□□□ -0.14
RPRD1A-202ENST00000399022 OR51E2Q9H255 320 aa14.15□□□□□ -0.14
RPRD1A-202ENST00000399022 TAS2R7Q9NYW3 318 aa14.15□□□□□ -0.14
RPRD1A-202ENST00000399022 PCDHB14Q9Y5E9 798 aa14.15□□□□□ -0.14
RPRD1A-202ENST00000399022 MEIOCA2RUB1 952 aa14.15□□□□□ -0.14
RPRD1A-202ENST00000399022 MID1O15344 667 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms