RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 FNDC8Q8TC99 324 aa4.78□□□□□ -1.65
SMAD4-202ENST00000398417 GTF2H4Q92759 462 aa4.78□□□□□ -1.65
SMAD4-202ENST00000398417 CIDECQ96AQ7 238 aaPredicted RBP4.78□□□□□ -1.65
SMAD4-202ENST00000398417 TTLL2Q9BWV7 592 aa4.78□□□□□ -1.65
SMAD4-202ENST00000398417 IKZF5Q9H5V7 419 aa4.78□□□□□ -1.65
SMAD4-202ENST00000398417 RETREG1Q9H6L5 497 aa4.78□□□□□ -1.65
SMAD4-202ENST00000398417 TM9SF3Q9HD45 589 aa4.78□□□□□ -1.65
SMAD4-202ENST00000398417 DNAJC13O75165 2243 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 FAM25AB3EWG3 89 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 FAM25CB3EWG5 89 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 FAM25GB3EWG6 89 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 PCDH7O60245 1069 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 VNN2O95498 520 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 S100A5P33763 92 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 KDELR2P33947 212 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 DAPP51397 102 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 NTHL1P78549 312 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 TEAD2Q15562 447 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 DEFB115Q30KQ5 88 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 TBC1D25Q3MII6 688 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 ERAP2Q6P179 960 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 Q6ZNX1 250 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 EIF3MQ7L2H7 374 aaKnown RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 B3GNT8Q7Z7M8 397 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 SLC51BQ86UW2 128 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 DCP2Q8IU60 420 aaKnown RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 NAGSQ8N159 534 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 CACTIN-AS1Q8N1I8 211 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 GLB1L3Q8NCI6 653 aaPredicted RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 OR4K1Q8NGD4 311 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 ZNF461Q8TAF7 563 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 HERC2P3Q9BVR0 1158 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 TMCC3Q9ULS5 477 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 ERVW-1Q9UQF0 538 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 WBP11Q9Y2W2 641 aaKnown RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 TMEM98Q9Y2Y6 226 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 KIAA0100Q14667 2235 aaKnown RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 H0Y858 1186 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 CYP7B1O75881 506 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 IFNA14P01570 189 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 C1QCP02747 245 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 JAK1P23458 1154 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 FSHRP23945 695 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 HTR1BP28222 390 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 SERPINB1P30740 379 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 CTSCP53634 463 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 SLBPQ14493 270 aaKnown RBP eCLIP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 NOXRED1Q6NXP6 359 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 AGTRAPQ6RW13 159 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 GDPD4Q6W3E5 623 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 TMEM179BQ7Z7N9 219 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 LILRA3Q8N6C8 439 aaPredicted RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 ABHD11Q8NFV4 315 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 MCFD2Q8NI22 146 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 PEX13Q92968 403 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 CCDC74BQ96LY2 380 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 CCM2Q9BSQ5 444 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 TRIM39Q9HCM9 518 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 CREBZFQ9NS37 354 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 IMPAD1Q9NX62 359 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 SLC25A37Q9NYZ2 338 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 RABL2BQ9UNT1 228 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 RUVBL1Q9Y265 456 aaKnown RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 COL24A1Q17RW2 1714 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 A0A1W2PRB8 838 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 M0QX08 132 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 PRR35P0CG20 571 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 PRKAR1AP10644 381 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 HMGA1P17096 107 aaKnown RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 NSG1P42857 185 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 PSMD8P48556 350 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 CLK3P49761 638 aaKnown RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 MC1RQ01726 317 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 CBX2Q14781 532 aaPredicted RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 PYCR3Q53H96 274 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 FRG2Q64ET8 278 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 FAAH2Q6GMR7 532 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 SERPINA13PQ6UXR4 307 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 GPR65Q8IYL9 337 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 LGI4Q8N135 537 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 TEX19Q8NA77 164 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 GOLM1Q8NBJ4 401 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 ZNF548Q8NEK5 533 aaPredicted RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 PROX1Q92786 737 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 AP2M1Q96CW1 435 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 CAPNS2Q96L46 248 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 FRG2BQ96QU4 278 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 NELFAQ9H3P2 528 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 TOR4AQ9NXH8 423 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 PHF3Q92576 2039 aaKnown RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 SLC1A7O00341 560 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 C8AP07357 584 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 JUPP14923 745 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 PTPN6P29350 595 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 CNTN1Q12860 1018 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 CSTF3Q12996 717 aaKnown RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 EXOC3L2Q2M3D2 409 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 CYBRD1Q53TN4 286 aa4.77□□□□□ -1.65
SMAD4-202ENST00000398417 ZC3H12BQ5HYM0 836 aaKnown RBP4.77□□□□□ -1.65
SMAD4-202ENST00000398417 CATSPEREQ5SY80 951 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms