RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 H0YIG0 161 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 TAPBPO15533 448 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 H2AFYO75367 372 aaKnown RBP13.6□□□□□ -0.23
HDDC2-202ENST00000398153 WDR47O94967 919 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 RBP1P09455 135 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 PRKAR1AP10644 381 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 NCF1P14598 390 aaPredicted RBP13.6□□□□□ -0.23
HDDC2-202ENST00000398153 ITGAXP20702 1163 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 FOLR3P41439 243 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 SKP1P63208 163 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 DLG1Q12959 904 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 HKDC1Q2TB90 917 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 LINC00303Q3SY05 128 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 UBAP2Q5T6F2 1119 aaKnown RBP13.6□□□□□ -0.23
HDDC2-202ENST00000398153 ATG9BQ674R7 924 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 TIFABQ6ZNK6 161 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 LRRC70Q7Z2Q7 622 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 VN1R4Q7Z5H5 301 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 ASPGQ86U10 573 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 APLFQ8IW19 511 aaPredicted RBP13.6□□□□□ -0.23
HDDC2-202ENST00000398153 TRPV3Q8NET8 790 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 TTLQ8NG68 377 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 SLC13A3Q8WWT9 602 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 SLC39A7Q92504 469 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 EXTL1Q92935 676 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 VPS50Q96JG6 964 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 C10orf90Q96M02 699 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 CD244Q9BZW8 370 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 NT5DC2Q9H857 520 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 SLC22A11Q9NSA0 550 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 DNAJC11Q9NVH1 559 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 COPG2Q9UBF2 871 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 ZFP69BQ9UJL9 534 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 TMCO1Q9UM00 188 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 SH2B3Q9UQQ2 575 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 KCNMB2Q9Y691 235 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 SLC22A7Q9Y694 548 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 ZFYVE26Q68DK2 2539 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 FER1L5A0AVI2 2057 aa13.6□□□□□ -0.23
HDDC2-202ENST00000398153 IGLV3-12A0A075B6K2 115 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 IQANK1A0A1B0GTG1 560 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 CDC14CA4D256 554 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 URADA6NGE7 173 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 VSTM2BA6NLU5 285 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 EIF4E1BA6NMX2 242 aaKnown RBP13.59□□□□□ -0.23
HDDC2-202ENST00000398153 MAP2K7O14733 419 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 PCDH17O14917 1159 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 CLGNO14967 610 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 OR1F1O43749 312 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 LCMT2O60294 686 aaKnown RBP13.59□□□□□ -0.23
HDDC2-202ENST00000398153 NSA2O95478 260 aaKnown RBP13.59□□□□□ -0.23
HDDC2-202ENST00000398153 C1GALT1C1LP0DN25 315 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 HPDP32754 393 aaPredicted RBP13.59□□□□□ -0.23
HDDC2-202ENST00000398153 BCL6P41182 706 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 SCTRP47872 440 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 AVPR1BP47901 424 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 KCNC1P48547 511 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 RPS18P62269 152 aaKnown RBP13.59□□□□□ -0.23
HDDC2-202ENST00000398153 OCA2Q04671 838 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 PCDH1Q08174 1060 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 LAPTM5Q13571 262 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 DSG2Q14126 1118 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 NKG7Q16617 165 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 DEFB109BQ30KR1 87 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 SOWAHCQ53LP3 525 aaPredicted RBP13.59□□□□□ -0.23
HDDC2-202ENST00000398153 CATSPEREQ5SY80 951 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 TMEM214Q6NUQ4 689 aaKnown RBP13.59□□□□□ -0.23
HDDC2-202ENST00000398153 PCSK4Q6UW60 755 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 MED25Q71SY5 747 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 PLD3Q8IV08 490 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 KRT78Q8N1N4 520 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 TMEM102Q8N9M5 508 aaPredicted RBP13.59□□□□□ -0.23
HDDC2-202ENST00000398153 UBTD2Q8WUN7 234 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 KCTD4Q8WVF5 259 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 COL26A1Q96A83 441 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 TSNARE1Q96NA8 513 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 GPR78Q96P69 363 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 RUFY1Q96T51 708 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 TMEM79Q9BSE2 394 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 UNKQ9C0B0 810 aaKnown RBP13.59□□□□□ -0.23
HDDC2-202ENST00000398153 TGIF2Q9GZN2 237 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 VPS11Q9H270 941 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 ANKZF1Q9H8Y5 726 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 CLK4Q9HAZ1 481 aaKnown RBP13.59□□□□□ -0.23
HDDC2-202ENST00000398153 GEMIN8Q9NWZ8 242 aaKnown RBP13.59□□□□□ -0.23
HDDC2-202ENST00000398153 ZNF282Q9UDV7 671 aaPredicted RBP13.59□□□□□ -0.23
HDDC2-202ENST00000398153 MAN2B2Q9Y2E5 1009 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 PTRH2Q9Y3E5 179 aaKnown RBP13.59□□□□□ -0.23
HDDC2-202ENST00000398153 MAP4K5Q9Y4K4 846 aa13.59□□□□□ -0.23
HDDC2-202ENST00000398153 TNPO3Q9Y5L0 923 aaKnown RBP13.59□□□□□ -0.23
HDDC2-202ENST00000398153 FEZF1A0PJY2 475 aa13.58□□□□□ -0.24
HDDC2-202ENST00000398153 TRIM49D1C9J1S8 452 aa13.58□□□□□ -0.24
HDDC2-202ENST00000398153 KLK8O60259 260 aa13.58□□□□□ -0.24
HDDC2-202ENST00000398153 CYC1P08574 325 aa13.58□□□□□ -0.24
HDDC2-202ENST00000398153 MTHFD2P13995 350 aa13.58□□□□□ -0.24
HDDC2-202ENST00000398153 FBLP22087 321 aaKnown RBP13.58□□□□□ -0.24
HDDC2-202ENST00000398153 CASP2P42575 452 aa13.58□□□□□ -0.24
HDDC2-202ENST00000398153 GDF5P43026 501 aa13.58□□□□□ -0.24
HDDC2-202ENST00000398153 ALDH18A1P54886 795 aaKnown RBP13.58□□□□□ -0.24
HDDC2-202ENST00000398153 RRADP55042 308 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms