RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 TBC1D19Q8N5T2 526 aa20.21■□□□□ 0.83
TSPAN4-206ENST00000397408 ZSCAN1Q8NBB4 408 aa20.21■□□□□ 0.83
TSPAN4-206ENST00000397408 MFSD9Q8NBP5 474 aa20.21■□□□□ 0.83
TSPAN4-206ENST00000397408 AIF1LQ9BQI0 150 aa20.21■□□□□ 0.83
TSPAN4-206ENST00000397408 MRPL46Q9H2W6 279 aaKnown RBP20.21■□□□□ 0.83
TSPAN4-206ENST00000397408 PRORYQ9H606 182 aa20.21■□□□□ 0.83
TSPAN4-206ENST00000397408 OPTCQ9UBM4 332 aa20.21■□□□□ 0.83
TSPAN4-206ENST00000397408 A0A1W2PPM1 405 aa20.2■□□□□ 0.82
TSPAN4-206ENST00000397408 FOXO6A8MYZ6 492 aa20.2■□□□□ 0.82
TSPAN4-206ENST00000397408 C9J4A7 227 aa20.2■□□□□ 0.82
TSPAN4-206ENST00000397408 TXNDC9O14530 226 aa20.2■□□□□ 0.82
TSPAN4-206ENST00000397408 OR1F1O43749 312 aa20.2■□□□□ 0.82
TSPAN4-206ENST00000397408 KLK8O60259 260 aa20.2■□□□□ 0.82
TSPAN4-206ENST00000397408 ALDH18A1P54886 795 aaKnown RBP20.2■□□□□ 0.82
TSPAN4-206ENST00000397408 DCDP81605 110 aaKnown RBP20.2■□□□□ 0.82
TSPAN4-206ENST00000397408 MUM1Q2TAK8 710 aa20.2■□□□□ 0.82
TSPAN4-206ENST00000397408 NKAIN1Q4KMZ8 207 aa20.2■□□□□ 0.82
TSPAN4-206ENST00000397408 SLCO4C1Q6ZQN7 724 aa20.2■□□□□ 0.82
TSPAN4-206ENST00000397408 METTL27Q8N6F8 245 aaPredicted RBP20.2■□□□□ 0.82
TSPAN4-206ENST00000397408 MRPL57Q9BQC6 102 aaKnown RBP20.2■□□□□ 0.82
TSPAN4-206ENST00000397408 SARGQ9BW04 601 aa20.2■□□□□ 0.82
TSPAN4-206ENST00000397408 CAPS2Q9BXY5 557 aa20.2■□□□□ 0.82
TSPAN4-206ENST00000397408 NLNQ9BYT8 704 aa20.2■□□□□ 0.82
TSPAN4-206ENST00000397408 PCDHGA6Q9Y5G7 932 aa20.2■□□□□ 0.82
TSPAN4-206ENST00000397408 TLDC2A0PJX2 215 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 ZNF891A8MT65 544 aaPredicted RBP20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 K7EPI3 171 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 CLGNO14967 610 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 C1GALT1C1LP0DN25 315 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 ITGAXP20702 1163 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 RPS18P62269 152 aaKnown RBP20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 RPS15P62841 145 aaKnown RBP20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 SLBPQ14493 270 aaKnown RBP eCLIP20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 NCF4Q15080 339 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 ATG9BQ674R7 924 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 ASPGQ86U10 573 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 LCA5Q86VQ0 697 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 PTGR2Q8N8N7 351 aaPredicted RBP20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 ENDOVQ8N8Q3 282 aaKnown RBP20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 MACROD1Q9BQ69 325 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 C17orf62Q9BQA9 187 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 GPR87Q9BY21 358 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 ACTL8Q9H568 366 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 IFT80Q9P2H3 777 aaPredicted RBP20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 LRRC14BA6NHZ5 514 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 SMIM24O75264 130 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 CAPN1P07384 714 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 EPORP19235 508 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 PTPN4P29074 926 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 SCTRP47872 440 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 EMP3P54852 163 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 NFKB2Q00653 900 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 GARNL3Q5VVW2 1013 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 GPR155Q7Z3F1 870 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 ARHGEF39Q8N4T4 335 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 CAMKVQ8NCB2 501 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 SNRNP27Q8WVK2 155 aaKnown RBP20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 SLC13A3Q8WWT9 602 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 PHF21BQ96EK2 531 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 GEMIN8Q9NWZ8 242 aaKnown RBP20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 TMEM216Q9P0N5 145 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 TMCO1Q9UM00 188 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 PLAAQ9Y263 795 aa20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 FARSAQ9Y285 508 aaKnown RBP20.19■□□□□ 0.82
TSPAN4-206ENST00000397408 MGAQ8IWI9 3026 aa20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 NDUFS4O43181 175 aa20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 PRAMEF4O60810 478 aa20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 SIX3O95343 332 aaPredicted RBP20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 RAB40ALP0C0E4 278 aa20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 SLC35G6P0C7Q6 338 aa20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 PRKAR1AP10644 381 aa20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 OR1D4P47884 311 aa20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 CYP4F2P78329 520 aa20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 RBBP5Q15291 538 aaKnown RBP20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 XKR6Q5GH73 641 aa20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 PRAMEF9Q5VWM5 478 aa20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 MLIPQ5VWP3 458 aa20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 RIBC1Q8N443 379 aaPredicted RBP20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 TEX9Q8N6V9 391 aa20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 TM4SF19Q96DZ7 209 aa20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 EHD1Q9H4M9 534 aa20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 RRAGDQ9NQL2 400 aaPredicted RBP20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 SLC22A11Q9NSA0 550 aa20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 GPN3Q9UHW5 284 aaPredicted RBP20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 ZFP69BQ9UJL9 534 aa20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 LHX6Q9UPM6 363 aa20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 MRPS2Q9Y399 296 aaKnown RBP20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 ANGPTL3Q9Y5C1 460 aa20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 MAU2Q9Y6X3 613 aa20.18■□□□□ 0.82
TSPAN4-206ENST00000397408 LOC400499M0QZD8 3231 aa20.17■□□□□ 0.82
TSPAN4-206ENST00000397408 NKX2-8O15522 239 aa20.17■□□□□ 0.82
TSPAN4-206ENST00000397408 H2AFYO75367 372 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-206ENST00000397408 SERPIND1P05546 499 aa20.17■□□□□ 0.82
TSPAN4-206ENST00000397408 GSTA1P08263 222 aa20.17■□□□□ 0.82
TSPAN4-206ENST00000397408 SBK3P0C264 359 aa20.17■□□□□ 0.82
TSPAN4-206ENST00000397408 EPB42P16452 691 aa20.17■□□□□ 0.82
TSPAN4-206ENST00000397408 CXCR2P25025 360 aa20.17■□□□□ 0.82
TSPAN4-206ENST00000397408 AHRP35869 848 aa20.17■□□□□ 0.82
TSPAN4-206ENST00000397408 MC1RQ01726 317 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms