RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 CUBNO60494 3623 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 A0A1B0GTH9 108 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 TXNDC9O14530 226 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 PJA2O43164 708 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 CDC40O60508 579 aaKnown RBP eCLIP8.87□□□□□ -0.99
NEDD9-203ENST00000397378 VPS26AO75436 327 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 SEC24DO94855 1032 aaPredicted RBP8.87□□□□□ -0.99
NEDD9-203ENST00000397378 C1orf105O95561 183 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 CMPK1P30085 196 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 PTPN7P35236 360 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 PPARGP37231 505 aaPredicted RBP8.87□□□□□ -0.99
NEDD9-203ENST00000397378 RELAQ04206 551 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 CBLBQ13191 982 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 TMED2Q15363 201 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 OR1C1Q15619 314 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 BTBD16Q32M84 506 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 FCRLBQ6BAA4 426 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 SPINK14Q6IE38 97 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 LRRC8BQ6P9F7 803 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 PODNL1Q6PEZ8 512 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 AFTPHQ6ULP2 937 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 LUZP1Q86V48 1076 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 PAQR7Q86WK9 346 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 P3H2Q8IVL5 708 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 CSNK1A1LQ8N752 337 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 HORMAD2Q8N7B1 307 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 OR10Q1Q8NGQ4 319 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 OR13J1Q8NGT2 312 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 MRFAP1L1Q96HT8 127 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 Q96MF0 132 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 CYTH2Q99418 400 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 CHP1Q99653 195 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 NPAS2Q99743 824 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 PLCD4Q9BRC7 762 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 BDH2Q9BUT1 245 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 VN1R1Q9GZP7 353 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 TP63Q9H3D4 680 aaPredicted RBP8.87□□□□□ -0.99
NEDD9-203ENST00000397378 GOLPH3Q9H4A6 298 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 NHEJ1Q9H9Q4 299 aaPredicted RBP8.87□□□□□ -0.99
NEDD9-203ENST00000397378 BEX4Q9NWD9 120 aaPredicted RBP8.87□□□□□ -0.99
NEDD9-203ENST00000397378 IFNKQ9P0W0 207 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 SPATA7Q9P0W8 599 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 C19orf25Q9UFG5 118 aaPredicted RBP8.87□□□□□ -0.99
NEDD9-203ENST00000397378 RIMKLBQ9ULI2 386 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 HRH3Q9Y5N1 445 aa8.87□□□□□ -0.99
NEDD9-203ENST00000397378 MPDZO75970 2070 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 A0A0A6YYC8 382 aaPredicted RBP8.86□□□□□ -0.99
NEDD9-203ENST00000397378 MACROD2A1Z1Q3 448 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 IQCF5A8MTL0 148 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 I3L1I5 382 aaPredicted RBP8.86□□□□□ -0.99
NEDD9-203ENST00000397378 KPNA5O15131 536 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 PSMD3O43242 534 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 NEURL1O76050 574 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 SUN1O94901 812 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 GOT2P00505 430 aaKnown RBP8.86□□□□□ -0.99
NEDD9-203ENST00000397378 IFNA2P01563 188 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 SP1P08047 785 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 ERGP11308 486 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 PKMP14618 531 aaKnown RBP8.86□□□□□ -0.99
NEDD9-203ENST00000397378 CTNNA2P26232 953 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 CCNFP41002 786 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 AGTR2P50052 363 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 NUP107P57740 925 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 OC90Q02509 493 aaPredicted RBP8.86□□□□□ -0.99
NEDD9-203ENST00000397378 ACVR1Q04771 509 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 TRIM14Q14142 442 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 FASTKQ14296 549 aaKnown RBP8.86□□□□□ -0.99
NEDD9-203ENST00000397378 EXT1Q16394 746 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 SYT16Q17RD7 645 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 HKDC1Q2TB90 917 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 CCSMST1Q4G0I0 132 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 SLC25A25Q6KCM7 469 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 LANCL3Q6ZV70 420 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 ACAD11Q709F0 780 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 LINC00523Q86TU6 105 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 CRLF3Q8IUI8 442 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 LGI4Q8N135 537 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 OR5M3Q8NGP4 307 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 OR4L1Q8NH43 312 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 GSDMBQ8TAX9 411 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 M1APQ8TC57 530 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 MAGEC3Q8TD91 643 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 KRT35Q92764 455 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 OR2A5Q96R48 311 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 OLFM1Q99784 485 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 OSBPL8Q9BZF1 889 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 SLC6A16Q9GZN6 736 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 SYNPO2LQ9H987 977 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 KCNK13Q9HB14 408 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 MRPS30Q9NP92 439 aaKnown RBP8.86□□□□□ -0.99
NEDD9-203ENST00000397378 MMP25Q9NPA2 562 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 PIH1D1Q9NWS0 290 aaKnown RBP8.86□□□□□ -0.99
NEDD9-203ENST00000397378 UTP6Q9NYH9 597 aaKnown RBP8.86□□□□□ -0.99
NEDD9-203ENST00000397378 TTC7AQ9ULT0 858 aaPredicted RBP8.86□□□□□ -0.99
NEDD9-203ENST00000397378 NFS1Q9Y697 457 aa8.86□□□□□ -0.99
NEDD9-203ENST00000397378 ARHGAP21Q5T5U3 1957 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 EML6Q6ZMW3 1958 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 IGHV3-20A0A0C4DH32 117 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 IGKV1-8A0A0C4DH67 115 aa8.85□□□□□ -0.99
NEDD9-203ENST00000397378 A0A0U1RQJ8 604 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms