RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 BATF3Q9NR55 127 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 ASIC5Q9NY37 505 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 ADA2Q9NZK5 511 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 RIMS3Q9UJD0 308 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 PLAGL1Q9UM63 463 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 PCDHGB2Q9Y5G2 931 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 DNAH14Q0VDD8 3507 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 DYTNA2CJ06 578 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 FAM234BA2RU67 622 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 KRT87PA6NCN2 255 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 ANKRD28O15084 1053 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 STK16O75716 305 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 HSD17B1P14061 328 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 HNMTP50135 292 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 MRPS22P82650 360 aaKnown RBP14.36□□□□□ -0.11
CAPN3-207ENST00000397200 RPS6KA2Q15349 733 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 INAVAQ3KP66 663 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 IZUMO2Q6UXV1 221 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 TRIM46Q7Z4K8 759 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 C17orf82Q86X59 251 aaPredicted RBP14.36□□□□□ -0.11
CAPN3-207ENST00000397200 ZFAND4Q86XD8 727 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 PDSS2Q86YH6 399 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 EID2Q8N6I1 236 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 HIPK4Q8NE63 616 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 OR52E1Q8NGJ3 308 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 ZFPM2Q8WW38 1151 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 ATL1Q8WXF7 558 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 USP7Q93009 1102 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 TEX37Q96LM6 180 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 PPP3R2Q96LZ3 170 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 SLC32A1Q9H598 525 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 PARD6AQ9NPB6 346 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 TMEM9BQ9NQ34 198 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 GID8Q9NWU2 228 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 SPATA7Q9P0W8 599 aa14.36□□□□□ -0.11
CAPN3-207ENST00000397200 FRYLO94915 3013 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 TCRBV3S1A0A5B6 114 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 NME4O00746 187 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 FOXD2O60548 495 aaPredicted RBP14.35□□□□□ -0.11
CAPN3-207ENST00000397200 KATNA1O75449 491 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 SLC22A3O75751 556 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 SLC16A8O95907 504 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 EPB42P16452 691 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 HMOX2P30519 316 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 FASLGP48023 281 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 SLC7A2P52569 658 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 NME5P56597 212 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 KCNK10P57789 538 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 GPR18Q14330 331 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 ABRAXAS2Q15018 415 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 PLCL1Q15111 1095 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 TLR1Q15399 786 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 ZXDCQ2QGD7 858 aaPredicted RBP14.35□□□□□ -0.11
CAPN3-207ENST00000397200 VPS26BQ4G0F5 336 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 AASDHQ4L235 1098 aaPredicted RBP14.35□□□□□ -0.11
CAPN3-207ENST00000397200 IRGCQ6NXR0 463 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 SCIMPQ6UWF3 145 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 PRR23CQ6ZRP0 262 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 SLC35F3Q8IY50 421 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 KLHDC8AQ8IYD2 350 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 FNDC5Q8NAU1 212 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 N4BP2L2Q92802 583 aaPredicted RBP14.35□□□□□ -0.11
CAPN3-207ENST00000397200 SH3KBP1Q96B97 665 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 FBXL8Q96CD0 374 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 RAB11FIP5Q9BXF6 653 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 ACTL8Q9H568 366 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 STOX2Q9P2F5 926 aaPredicted RBP14.35□□□□□ -0.11
CAPN3-207ENST00000397200 OTOGLQ3ZCN5 2332 aa14.35□□□□□ -0.11
CAPN3-207ENST00000397200 ARID1BQ8NFD5 2236 aaPredicted RBP14.35□□□□□ -0.11
CAPN3-207ENST00000397200 ZNF839A8K0R7 811 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 NPIPB8E9PQR5 432 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 SLC28A1O00337 649 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 CDX4O14627 284 aaPredicted RBP14.34□□□□□ -0.11
CAPN3-207ENST00000397200 SIGLEC6O43699 453 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 NPPAP01160 153 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 JAK1P23458 1154 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 SLC6A2P23975 617 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 PEX2P28328 305 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 IMPA1P29218 277 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 IL12AP29459 219 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 MSX2P35548 267 aaPredicted RBP14.34□□□□□ -0.11
CAPN3-207ENST00000397200 HSD17B2P37059 387 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 GDF5P43026 501 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 RAB28P51157 221 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 UFM1P61960 85 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 RHDQ02161 417 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 SLC14A1Q13336 389 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 BLMHQ13867 455 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.34□□□□□ -0.11
CAPN3-207ENST00000397200 AGTRAPQ6RW13 159 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 TMEM26Q6ZUK4 368 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 TICAM1Q8IUC6 712 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 DPP10Q8N608 796 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 FAM156AQ8NDB6 213 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 PROKR1Q8TCW9 393 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 LCN9Q8WX39 176 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 ATP6V1E2Q96A05 226 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 LRRC58Q96CX6 371 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 IL17FQ96PD4 163 aa14.34□□□□□ -0.11
CAPN3-207ENST00000397200 SLC39A3Q9BRY0 314 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms